Gene Nmar_0812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0812 
Symbol 
ID5774370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp717175 
End bp717591 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content34% 
IMG OID641316450 
Producthypothetical protein 
Protein accessionYP_001582146 
Protein GI161528320 
COG category[S] Function unknown 
COG ID[COG2090] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.465154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATTCA AAATTGAATT TTCAGGACAT GAAAATATTA GATCAAATCA CCAAAAAACC 
ATAGAGATTA CAAAAGAGTC TCATTTGACA CCTCAGGGTG ATTGTATTGT TGGTGTAAAT
GCAAATCACG CATGCGCGGA TTTACCACAA GATCTTAAAG AGAAATTAAA AAACCCTGAT
TCAAAAATTA CATTTTCTAT TGATGTGGGA GAACATAATT TCACCATTGA AGGAAAGGGT
CATCCTGATC TTATTCTTAC ACATGATGAA GATATCGTGA TTCGAAAAAG CGACTTTGTT
TGTCCTAGAA CTTTGGCTGT TAAATGTGAC AAAGCATCTG ATTTGTTACC CCGAGAAATG
GTTTCTATGT TACAAGATCC TAAAACTAAA GGCACCTTTA CAATTACTGT TGATTAA
 
Protein sequence
MKFKIEFSGH ENIRSNHQKT IEITKESHLT PQGDCIVGVN ANHACADLPQ DLKEKLKNPD 
SKITFSIDVG EHNFTIEGKG HPDLILTHDE DIVIRKSDFV CPRTLAVKCD KASDLLPREM
VSMLQDPKTK GTFTITVD