| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0718 |
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| Symbol | |
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| ID | 5774103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 653242 |
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| End bp | 654609 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641316355 |
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| Product | binding-protein-dependent transporter inner membrane protein |
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| Protein accession | YP_001582052 |
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| Protein GI | 161528226 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAGTA TAACACCTCA GGAAATCAAG CAAGAGTTTC TTAAAAGCAA AATAGGAATT
GCAGGGATTA CAATTTTGAG CATACTCGTA ACAACATCAA TTATTGCAAT TATTGCAATT
CCAGTAGAAA CATTTCAAGA ATGGAATAAT CCAGGAAATT GGATTTCATA TCCCAAAGTT
GCAGTTCCAA TTTGGATAAA TATTTTCATG ACTGAAAAAA TTCCTGAACA TAAAATTCTA
GAAAATCCAC ACATTCAAAC AAATTCAGAA GGAGAGATTA TGTTATCATC CCATAAATTT
GGAATAAATT TTGATTATGA ATTTTTTCCA AATGATTTTA TCTATGTTTT TTCATCAGAG
TATTCTGAAT CAGTGTTATT ACAAATGTCA GTCACAAGAC CAGATGGAAT AAAATTAGAA
TTATCATCCA CATCATTACC TTATTCACAT ACTAAAACAG TTCATAGTGA AAGAATTTTT
TCAACAGATG AAACAATAAA GAAAAATTTG TTATTGCAAT CAGACTTGTT TGATTTCAAT
TTAGAAAGAC TATCAGCTGA AGATATTGTA TTTTCAAATA CCAAAACAAA TGAACCGCTA
AAAGGAAATT ATATTTTTTC AGTTGACACA TATTCTATTA ATTCTGAAAT TAAAAGCCAT
GAATCAAAAT TGATCATAGG TGGAAAAGCA TTTGGAATGA TGGGGACAGA TGAATTAAGA
CGAGACCTTG CCATAGGACT GTTATGGGGA ACTCCACTTG CTTTGTTTAT CGGTTTAGTG
GTATCCATTG CATCGGTAAT AATGGGATTA TTGTATGGGG TGTATGCAGG ATTCAAAGGT
AAAAAAACAG ACGAGGTGAT GATGAGATTC AATGATGTAA TCTATGCATT ACCGGCACTT
CCATTTTTGA TAATTTTATC AGTCACGATT AGTAACAGTA TATTCGTTCT AGTAGGGTTT
TTGATGATTT TTGGATGGGT AGGAATTGCA AAGGTTGCAA GAAGTATGTC TTTACAAATC
AAGACCAAAG GATATGTGGA TGCAGCAAAC ATGATGGGGC AAAAAAATTC CAAAATTGTA
CTCAAACACA TCTTACCGCA GTTACTCCCA TATGCATTTG CGAGCATTGC GATATCAGTA
CCAGCAGCAA TAACTACGGA GGCAGGTTTG AGTTTTCTAG GATTAGGAGA CCCATCATTT
CCAACATGGG GACATATACT TCATGATGCA AATACATTCG GAGCAGCTGC AAGAGGATTA
TGGTGGTGGA TCATGCCTCC AGGAGTAATG ATTGCAATTG CAGGACTTGC ATTTGTATTC
ATAGGAAATG CACTTGATGC AATTGTCAAT CCAAAGTTAA AAAGATGA
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| Protein sequence | MSSITPQEIK QEFLKSKIGI AGITILSILV TTSIIAIIAI PVETFQEWNN PGNWISYPKV
AVPIWINIFM TEKIPEHKIL ENPHIQTNSE GEIMLSSHKF GINFDYEFFP NDFIYVFSSE
YSESVLLQMS VTRPDGIKLE LSSTSLPYSH TKTVHSERIF STDETIKKNL LLQSDLFDFN
LERLSAEDIV FSNTKTNEPL KGNYIFSVDT YSINSEIKSH ESKLIIGGKA FGMMGTDELR
RDLAIGLLWG TPLALFIGLV VSIASVIMGL LYGVYAGFKG KKTDEVMMRF NDVIYALPAL
PFLIILSVTI SNSIFVLVGF LMIFGWVGIA KVARSMSLQI KTKGYVDAAN MMGQKNSKIV
LKHILPQLLP YAFASIAISV PAAITTEAGL SFLGLGDPSF PTWGHILHDA NTFGAAARGL
WWWIMPPGVM IAIAGLAFVF IGNALDAIVN PKLKR
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