Gene Nmar_0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0684 
Symbol 
ID5774457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand- 
Start bp624050 
End bp625159 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content33% 
IMG OID641316320 
Productsmall GTP-binding protein 
Protein accessionYP_001582018 
Protein GI161528192 
COG category[R] General function prediction only 
COG ID[COG1163] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGAATTC CTGAAAAAAT TAAAGCCATT CAAGATGAGA TGGCGAGAAC TCAAATTAAC 
AAAGCTACAG AACACCATCT TGGATTACTA AAAGCAAAAA TTGCAAAACT CAAACGAGAA 
CAAGAAGACA ATGTTGCAAA AAAATCTGGA ATGAAATCAG ATGGGTTTGA TGTTAGAAGA 
ACAGGTGATG CAACAGTTGT GTTTATCGGA TTACCAAGTG TAGGAAAATC AACACTGCTA 
AACCGACTAA CAGGTGCAAA GTCAGCAGTA GGAGCATTTC AATTCACAAC TCTAACAGTA 
GTTCCAGGAA TGATGGAATA CAGAGGAGCA AAAATTCAGG TACTAGATTT ACCAGGAATC 
ATCAAAGGTG CATCAACAGG AAAAGGATTA GGAAAGAGAA TACTATCAGT AGCAAGAACC 
GCAGATTTGG TATTACTGGT TTTAGATGTA TTTCAGCCAT ATCATGAGGA TGTACTAGTT 
AACGAATTAG GAAATATCGG AATTAGATTA AATCAACTCC CACCAAACAT TACCATTGAA 
AAAGCATCAA TGGGAGGTAT TGCAATTGCA CAACAAGTAA AGCTTACAAG AATTACAGAA 
AAACATTTGA AAGATATCTT ACATCTTTAT GGAATAGTTA GTGCAAGAGT AGTTGTTAGA 
GAAGATATTA CATCAGAACA ACTATCAGAC CACATTGCAG GAAACATAAG TTATTCAAAA 
GCACTTACAA TTTTAAACAA AATTGATCTA GTTGATAAAA AATTCCTAGA TGATTTGAAA 
ACAAAAATAA AATCAGATGT AATCGAAGTG TCTGCAAATT CAGATATCAA TATTGAACAA 
TTAAAAGAAA AAATCTATGA AAAATTAAAG TTCATTAGAA TATACATGCG ACCAAAAGGA 
GGAGAAACAG ATTTCAAAGA ACCATTAATT GCAAGAGAAG GAGATACTGT TGAAGATATT 
TGTAACAAGT TACATCGAAG AATGAAAAGA GAGTTCAGAT ATGGAATGGT TTGGGGAAAG 
AGTGTAAAGT TTGGAGGACA AAGAGTAGGT TTGAGTCATA TTTTACAAGA CGAAGATGTG 
TTAACAATTA TCAAAACACG CGGAACATAA
 
Protein sequence
MGIPEKIKAI QDEMARTQIN KATEHHLGLL KAKIAKLKRE QEDNVAKKSG MKSDGFDVRR 
TGDATVVFIG LPSVGKSTLL NRLTGAKSAV GAFQFTTLTV VPGMMEYRGA KIQVLDLPGI 
IKGASTGKGL GKRILSVART ADLVLLVLDV FQPYHEDVLV NELGNIGIRL NQLPPNITIE 
KASMGGIAIA QQVKLTRITE KHLKDILHLY GIVSARVVVR EDITSEQLSD HIAGNISYSK 
ALTILNKIDL VDKKFLDDLK TKIKSDVIEV SANSDINIEQ LKEKIYEKLK FIRIYMRPKG 
GETDFKEPLI AREGDTVEDI CNKLHRRMKR EFRYGMVWGK SVKFGGQRVG LSHILQDEDV 
LTIIKTRGT