Gene Nmar_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0642 
Symbol 
ID5774249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp581336 
End bp582430 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content32% 
IMG OID641316278 
ProductDNA-directed DNA polymerase 
Protein accessionYP_001581976 
Protein GI161528150 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAACAA GAATCGTTTT CCACATTGAT TTTGACTATT TTTACGCCCA GTGTGAAGAG 
ATAAGATCAC CAGAATTAAA ATCAAAACCA GTTTGCGTAT GTGTATTTTC AGATAGAGGT
GGAGATAGTG GAGCAATTGC AACTGCAAAC TATACTGCAA GAAAATATGG TGCAAAGTCT
GGAATACCAA TAGTATTTGC AAAAAAAAGA TTAGAAGAGA GAAAAGATGC AGTTTTTCTG
CCTGTAGATT TTGATTATTA CTCTGAAATG TCTGAAAAAG CAATGAAAAT CATGGAAGAG
TTTTCAGATG TTTTTGAATA TGTAGGAAGA GACGAAGCAT ACTTGGATGT AACAAAAAGA
ACAGAGGGGG ATTTTCATAA AGCAAGTCAC TTGGCTCAAC AAATTAAAAA TTCCATAAGA
GAGAAAACAA AACTGAGTTG TTCAATAGGA ATTTCCCCAA ATAAATTAAT TTCAAAAATT
GCATCAGACT TTCAAAAACC TGATGGATTA ACAATTGTGT CTCCTGAAAA AGTTGAAGGG
TTTTTAGAGT CACTAAAAAT ACGAGACATT CCAGGAATTG GAAAGAAAAC AGAACAAAGG
TTTACAGAAA TGAATTTAGA GACAATTGGA GATGTAAAGA GACTTGATGT CTTTACTTTG
AATAAAGAGT TTGGGAGAAA AAGTGGAACT TACATTTACA ATGCAGTAAG AGGAATTGAC
GATGAACTAG TAAAAGAAAG AGAACCCAGT ATTCAACATG GAAAAATTGT GACCCTAAAA
AAAGATTCAA AAGATTATGA GTTTCTTTTA GAGAACACAT TAGAATTATG TAAAGAAGTT
CATGAAATAA TCCAAAAAAA AAATCAAATG TTCAAATCAG TTGGAATAAG TTTTGTTCAA
TCAGATTTAT CAAACAAAAC AAAATCAAAA ATGCTGAGAA ACCCTACTAT GAGTTTGGAG
GAATTAGAAA AAACAGTTGA ACAATTACTA AGAGAAGCCC TTGAAAATCA AACAGCAACT
ATTAGACGCT TGGGAGTCAA AGTCTCAGAG CTTTCAGAAA GTCAAGGACA AAGAGATATC
ACGAGTTATT TTTAG
 
Protein sequence
METRIVFHID FDYFYAQCEE IRSPELKSKP VCVCVFSDRG GDSGAIATAN YTARKYGAKS 
GIPIVFAKKR LEERKDAVFL PVDFDYYSEM SEKAMKIMEE FSDVFEYVGR DEAYLDVTKR
TEGDFHKASH LAQQIKNSIR EKTKLSCSIG ISPNKLISKI ASDFQKPDGL TIVSPEKVEG
FLESLKIRDI PGIGKKTEQR FTEMNLETIG DVKRLDVFTL NKEFGRKSGT YIYNAVRGID
DELVKEREPS IQHGKIVTLK KDSKDYEFLL ENTLELCKEV HEIIQKKNQM FKSVGISFVQ
SDLSNKTKSK MLRNPTMSLE ELEKTVEQLL REALENQTAT IRRLGVKVSE LSESQGQRDI
TSYF