| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0620 |
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| Symbol | |
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| ID | 5774200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 561296 |
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| End bp | 563041 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641316255 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001581954 |
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| Protein GI | 161528128 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3356] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAG AATCAGACGA TGTTTCAAAT ATTCACAATA GGTTTTCCCT TACCCTAGTA
AATCCATCAT CACATTACTT TTCACTAGTG GTATCACTGG GAGTGGCCGC AATAATTTCA
CTTGCAACAC TCTTGGGGTA TTTGGACAGT AGTATTGAAG AAGCATGGTA TATTGTACCT
GCAGTCATGA CAGTACTTTT CTTAACACAA TTACTTGATA CACGATTCAC AAAGAAAAAA
GAATACTCAA AGTCATTACA TTCCTCATTA TTTGCAAATA TGTTATGGGC TGCAACAGTA
TTGTTAGGAT TACTAGCAAG TTTTGTCTTA TCTAAAGAAA CATCATTGTT CTTTGTAACT
TTTGGAATGT TTCTCTTTGC AAGTTTTAGA ATTGGGATTT ACACTACAAC GCTTGGAGTA
AGTCTCAAGA AAGCATGGGC GATTTGTTTT GTTCAACCAT TAGCAATGTT TGCAGTTTTA
ATCCCACAAC ATTTGTGGAG TCCAATGTTC AGTGACCCAA TGACATTGTT TTACGGGATT
TCATTTATGA TAATTGCTAG TGTGTGGTCA GTACTTACAG ACAGAGCAGG AAGACCAGGA
ATGGAAAGTA CTCATAAAAC AATTCAAGCA TATCTTGCAT CACAAAAAAA TGATCATACA
GAAGCAGAAG AAATCATGGA AGAGCGCTCT AGTGAAACCA AGGTTGCAAC TTCACAAATA
AGATTGTCAG CTAATGACGG AGGTAAAGAA TTCAGAATGG TTCTACCTGA AATTCATCCA
GGTCCATATC ATCCAGTAGG GGGTAGCAAC ATACCATATT TGATTTACAA AAATTTGTCA
TCATCAGCCA TGGTGATGCA CAGTATATCA GACCATGCAC TCAATCTTCC ATCAAAAAAT
GAAGTTGAAA ATTATCTAAA GAATCTAGAA AACAGCAAAG TCAAAGAAGA AGGATTGCAG
TGTACAGAAC CAGTAACAGT CCAAATCAAC AAAGCAAGAG TGATTGGATT GCTTTTTGGA
AAAAACCCAT TACTGTTCTT GTCACTGTCA CCACATGGAA TGGAAGACAT TCCAAACTAC
ATGAAAAATG ATATTGAGCA ATATGCTAAA AACCGAAATT ATTCAAAACC GCTAATTGTT
GATTGTCACA ATGCAATGGG AGAAGAAATT TCAAGTGAAG ATGGGGAAGA TATGCTAAAA
GCTGCCAAAT CCTGTCTAGA CACTCTAATC ACAAAAGATA GTTTCCCAAT TGAATTTGGA
TATGCAAATT CAGATGACAT GGATGTTTGG ACTGAAGACT TGGGAATGGG TGGACTAGGA
ATAGTATGTC TCAAAATCAA TGAAAAAAAA TACTTTCTTG GATGGGCAGA TGCAAATAAT
ATGGAAAATG GAGTTAGAGA GAAGATCATA GATTTGTTTG CAAGAAAAGA CCTTCAACTA
CTTGAGATTT GCACATCAGA TACTCATTAT GCACCAGTGA AAGCCAGAAA TAGAAATGGA
TACTACCAAT TAGGATTGAT TACCAGTGCA GATAAACTTG CAAAATGGTT TTTGGAGATT
GCAAGCAATG CTGAATCTAA CACATCAACT GCAAAGTTTG AGATTTTAGA AAATGAAACA
GAAGTTAAAG TGATGGGACA AGGGATCTAT GAAGATTATT CAAAGGCATT AGATAACTCA
TTAAAAATCA CTAAAGGGTT TCTAATTGGA GGAGTAATAT TCTTCATAAC TAGTCTTTTT
CTATAG
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| Protein sequence | MEKESDDVSN IHNRFSLTLV NPSSHYFSLV VSLGVAAIIS LATLLGYLDS SIEEAWYIVP
AVMTVLFLTQ LLDTRFTKKK EYSKSLHSSL FANMLWAATV LLGLLASFVL SKETSLFFVT
FGMFLFASFR IGIYTTTLGV SLKKAWAICF VQPLAMFAVL IPQHLWSPMF SDPMTLFYGI
SFMIIASVWS VLTDRAGRPG MESTHKTIQA YLASQKNDHT EAEEIMEERS SETKVATSQI
RLSANDGGKE FRMVLPEIHP GPYHPVGGSN IPYLIYKNLS SSAMVMHSIS DHALNLPSKN
EVENYLKNLE NSKVKEEGLQ CTEPVTVQIN KARVIGLLFG KNPLLFLSLS PHGMEDIPNY
MKNDIEQYAK NRNYSKPLIV DCHNAMGEEI SSEDGEDMLK AAKSCLDTLI TKDSFPIEFG
YANSDDMDVW TEDLGMGGLG IVCLKINEKK YFLGWADANN MENGVREKII DLFARKDLQL
LEICTSDTHY APVKARNRNG YYQLGLITSA DKLAKWFLEI ASNAESNTST AKFEILENET
EVKVMGQGIY EDYSKALDNS LKITKGFLIG GVIFFITSLF L
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