| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0594 |
|---|
| Symbol | |
|---|
| ID | 5774148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 530634 |
|---|
| End bp | 531773 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641316228 |
|---|
| Product | 2-alkenal reductase |
|---|
| Protein accession | YP_001581928 |
|---|
| Protein GI | 161528102 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAT CAGGAGTGTT TGTAGGAGGA GCAATAGGTG CCGTAATTGT AGTAGCAATT
TTTGCAGTTT TGTTTGTATC TCCACCTGAA TCAGTAAAAC CCGATATCGT AGTAAGTAAC
GGTCATGGTC CAAGTACTGT AGGAGAAGTC ACTCCAGTTT ATTCAAAAGA TCTATCACTA
ATTGAGATAT TTGAAAAATC AGAACCAGGT GTTGTTAGAG TTAATGTTCA AAGAGAAGAA
GTGTCAGATG TAGGAGGAGT GGGTTCAGGT TTTGTGTTTG ACAAACAAGG TCACATAATA
ACAAACGAAC ATGTAATTGA TGATGCAAAA AAAATCATCA TAACATTTCT TGACGGTAGA
TCATATAATG CAGAAATTAT TGGAACAGAT GAATTTACAG ACCTTGCAGT AGTAAAAGTA
AATGCAGATT TGGCATTATT GCATCCACTC TCAATTGGGG ATTCTTCTAA TCTCAAAGTA
GGAGAGCCCA TTGCAGCAAT AGGAAACCCA TTTGGGCTAT CTGGCTCTAT GACATCAGGC
ATAGTTAGTC AATTAGGTCG ACTACTTCCA TCAGGTTCTG GATATTCAAT TCCAGATGTT
ATTCAAACAG ATGCTGCCAT CAATCCAGGA AACTCTGGAG GTCCACTGTT GAATATGAGA
GGAGAGATTG TAGGAATTAA CACAGCAATT CAATCAGCCA CAGGAGAATT TACGGGAGTT
GGATTTGCAA TCCCATCACA AACAGTTGCA AAGATAGTTC CAACATTAAT TGAAGATGGA
GATTACAAAC ACCCATGGAT TGGAATTTCT GGAAGAGATA TTGATCCTGA TTTGGCTAAA
GTTCTAGAAC TTCCAGATGC AGTAGGATTT TTGGTTGTGA CAGTGATAGA AGACAGTCCA
GCATCAAAAG CGGGACTGAT AGGTTCAGAG AAAACAATCG ATGTTGACGG AGTAAATTAT
CCAATGGGAG GAGATATAAT TTTAGCAGTA GATGGAATTG AAGTGAGAAA AATAGACGAT
ATTTTGATTC ATCTTCAAAG AGCAAAATCA GTTGGAGATG AGATGGTTTT AGAGGTTTTA
AGAGATGGTA GGACTACAGA CATCTCAATT ATTCTTCAAG AAAGACCAAA TGGAAATTAG
|
|---|
| Protein sequence | MDKSGVFVGG AIGAVIVVAI FAVLFVSPPE SVKPDIVVSN GHGPSTVGEV TPVYSKDLSL
IEIFEKSEPG VVRVNVQREE VSDVGGVGSG FVFDKQGHII TNEHVIDDAK KIIITFLDGR
SYNAEIIGTD EFTDLAVVKV NADLALLHPL SIGDSSNLKV GEPIAAIGNP FGLSGSMTSG
IVSQLGRLLP SGSGYSIPDV IQTDAAINPG NSGGPLLNMR GEIVGINTAI QSATGEFTGV
GFAIPSQTVA KIVPTLIEDG DYKHPWIGIS GRDIDPDLAK VLELPDAVGF LVVTVIEDSP
ASKAGLIGSE KTIDVDGVNY PMGGDIILAV DGIEVRKIDD ILIHLQRAKS VGDEMVLEVL
RDGRTTDISI ILQERPNGN
|
|---|
| |