Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0520 |
Symbol | |
ID | 5773486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 464980 |
End bp | 465363 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641316153 |
Product | 30S ribosomal protein S8e |
Protein accession | YP_001581854 |
Protein GI | 161528028 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2007] Ribosomal protein S8E |
TIGRFAM ID | [TIGR00307] ribosomal protein S8.e |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGAAAAT CAGTAGAAAA TTTAGCAACC AGTAAAACAA CTGGAGGAAG AAGACATCCA CTTAGAATTA GAAGAAAGTA TGAAACTGAT AGATATCCAA ATGAAGCAGT AACAGGAGCT CAAGTTACAG TAACAAGAAC AGTTCGTGGA AAGAATAGAA AGACAGCTGT TAAGACAATT GATTTTGTTA ATCTTGCAAC AGGAGATGCA AAAGTAAAGA AAGCAAAAAT TCTCAAAGTG TTAGACAATA CAACAAACAA TGATTACAAA AGACGTGGCA TTATTACAAA AGGTGCAATA CTAGAAACAC AAGAAGGTAA ATGCAAAGTA GTTTCTAAAC CAGGACAAAA CGGAATCGTT AACGCAATTT TAGTAAAGGA ATAA
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Protein sequence | MRKSVENLAT SKTTGGRRHP LRIRRKYETD RYPNEAVTGA QVTVTRTVRG KNRKTAVKTI DFVNLATGDA KVKKAKILKV LDNTTNNDYK RRGIITKGAI LETQEGKCKV VSKPGQNGIV NAILVKE
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