Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0465 |
Symbol | |
ID | 5773300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 418184 |
End bp | 418570 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641316096 |
Product | response regulator receiver protein |
Protein accession | YP_001581799 |
Protein GI | 161527973 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.000462355 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAGACAG CAATTGTTGT AGATAACGAT CATGATATTG TTGAGGTATT TTCTGACCTT TTAGAGATGC TAGAATTTGA TGTTATTTCT AAAGGATATG ATGGCGGCGA TGCTATAACA ATGTATGAAA AATTCAAACC AGATGTAATT TTCATGGATG TGCATATGGA AGAAATGCAT GGAGATCAAG CACTAAAAGA AATTAGAACA ATTGACAAGG ATGTAAAGGT AGTAATGGTA ACTGGGGATA TGTCAAAATC TATGGAAGAT ACATTGGAAA AATATGGTGC ATCGGCAATA ATTCACAAAC CCTTTGACAT TAAAATCATA AATGAAATTA TTACTGAACT AGAAAATGCA ACTTCTATAG TAATCCAAAA AGCATAA
|
Protein sequence | MKTAIVVDND HDIVEVFSDL LEMLEFDVIS KGYDGGDAIT MYEKFKPDVI FMDVHMEEMH GDQALKEIRT IDKDVKVVMV TGDMSKSMED TLEKYGASAI IHKPFDIKII NEIITELENA TSIVIQKA
|
| |