Gene Nmar_0391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0391 
Symbol 
ID5773282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp351689 
End bp352093 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content37% 
IMG OID641316020 
Product50S ribosomal protein L32e 
Protein accessionYP_001581725 
Protein GI161527899 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1717] Ribosomal protein L32E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.181601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCA ACAAAGACAA GATTGCAAAG AGACAGGAGA TCAAAGAACA CAATCCTGAT 
TTTGAAAGAC CAGAGAGTTG GCGTTATGTT AGACTTCAAA CTGGTTGGAG AAAACCAAAA
GGTATTGATC ATCATCAGAG AAAACAGTGG AGTAGAGGTC GTCCAGGTCT AGTCAAAGTA
GGATTTGGCG GACCAAAAGA TGCAAGAGGA TTACATCCAT CAGGATTTAC AGATAATTTA
GTTTACAATT TAGATGACTT GGCAAAACTT GATCCAAAAA AGGATGGAGT AAGATTAGGT
CACAGTGTAG GTACTAGAAA AAGAAAAGAG ATTGTTACAA AAGCAGTTGA GCAAAAATTC
AAAATTTTCA ATGCGAGAGT GAGTGCAAGT GGTAGTAAAT CTTAA
 
Protein sequence
MPINKDKIAK RQEIKEHNPD FERPESWRYV RLQTGWRKPK GIDHHQRKQW SRGRPGLVKV 
GFGGPKDARG LHPSGFTDNL VYNLDDLAKL DPKKDGVRLG HSVGTRKRKE IVTKAVEQKF
KIFNARVSAS GSKS