Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0391 |
Symbol | |
ID | 5773282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 351689 |
End bp | 352093 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641316020 |
Product | 50S ribosomal protein L32e |
Protein accession | YP_001581725 |
Protein GI | 161527899 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1717] Ribosomal protein L32E |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.181601 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGATCA ACAAAGACAA GATTGCAAAG AGACAGGAGA TCAAAGAACA CAATCCTGAT TTTGAAAGAC CAGAGAGTTG GCGTTATGTT AGACTTCAAA CTGGTTGGAG AAAACCAAAA GGTATTGATC ATCATCAGAG AAAACAGTGG AGTAGAGGTC GTCCAGGTCT AGTCAAAGTA GGATTTGGCG GACCAAAAGA TGCAAGAGGA TTACATCCAT CAGGATTTAC AGATAATTTA GTTTACAATT TAGATGACTT GGCAAAACTT GATCCAAAAA AGGATGGAGT AAGATTAGGT CACAGTGTAG GTACTAGAAA AAGAAAAGAG ATTGTTACAA AAGCAGTTGA GCAAAAATTC AAAATTTTCA ATGCGAGAGT GAGTGCAAGT GGTAGTAAAT CTTAA
|
Protein sequence | MPINKDKIAK RQEIKEHNPD FERPESWRYV RLQTGWRKPK GIDHHQRKQW SRGRPGLVKV GFGGPKDARG LHPSGFTDNL VYNLDDLAKL DPKKDGVRLG HSVGTRKRKE IVTKAVEQKF KIFNARVSAS GSKS
|
| |