Gene Nmar_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0376 
Symbol 
ID5774647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp342391 
End bp342768 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content30% 
IMG OID641316005 
Productresponse regulator receiver protein 
Protein accessionYP_001581710 
Protein GI161527884 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATAC AGGCTCTAGT TGTTGATGAT GATCAGAATG TATTGAACAC TTTTGTAGAT 
TTGTTAGATA TATGTAAAAT CAATGTTGTT GGAACTGCTA AAAATGGCAA AGAAGCAATT
GAACAATTCA AAAAATTAAC TCCAGATTTA GTATTTTTAG ATATTATGAT GCCTGAATTT
GATGGTCGTT ATGCTTTGAG GGAAATCAGA AATATTGATC AGAATATACC TGTAGTCATG
ATTTCTGGCG GAGATGATGA TGCGATTGAC AAATTATTGG AATTCAAACC CTCAGCTGTT
CTTCACAAAC CATTTCGAAT GAATACTTTA TTGGATATTT TAAAAAATGA ATTAAAATTG
GAACTAGATT CTAACTAA
 
Protein sequence
MTIQALVVDD DQNVLNTFVD LLDICKINVV GTAKNGKEAI EQFKKLTPDL VFLDIMMPEF 
DGRYALREIR NIDQNIPVVM ISGGDDDAID KLLEFKPSAV LHKPFRMNTL LDILKNELKL
ELDSN