Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0376 |
Symbol | |
ID | 5774647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 342391 |
End bp | 342768 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 641316005 |
Product | response regulator receiver protein |
Protein accession | YP_001581710 |
Protein GI | 161527884 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATAC AGGCTCTAGT TGTTGATGAT GATCAGAATG TATTGAACAC TTTTGTAGAT TTGTTAGATA TATGTAAAAT CAATGTTGTT GGAACTGCTA AAAATGGCAA AGAAGCAATT GAACAATTCA AAAAATTAAC TCCAGATTTA GTATTTTTAG ATATTATGAT GCCTGAATTT GATGGTCGTT ATGCTTTGAG GGAAATCAGA AATATTGATC AGAATATACC TGTAGTCATG ATTTCTGGCG GAGATGATGA TGCGATTGAC AAATTATTGG AATTCAAACC CTCAGCTGTT CTTCACAAAC CATTTCGAAT GAATACTTTA TTGGATATTT TAAAAAATGA ATTAAAATTG GAACTAGATT CTAACTAA
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Protein sequence | MTIQALVVDD DQNVLNTFVD LLDICKINVV GTAKNGKEAI EQFKKLTPDL VFLDIMMPEF DGRYALREIR NIDQNIPVVM ISGGDDDAID KLLEFKPSAV LHKPFRMNTL LDILKNELKL ELDSN
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