Gene Nmar_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0346 
Symbol 
ID5773056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp309252 
End bp309503 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content33% 
IMG OID641315974 
ProductRNA polymerase Rpb5 
Protein accessionYP_001581680 
Protein GI161527854 
COG category[K] Transcription 
COG ID[COG2012] DNA-directed RNA polymerase, subunit H, RpoH/RPB5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAACTA AGAAAAATCA AATTCTTGTA CCTGATCATA TCTATGTTCC AAAACATGAA 
ATCATTTCAA AAACAGAAGC TGAAGAAGTT TTAAAAAAAT ACAATTGTAA ACCAACCGAA
TTACCATTAA TCTTTGTAAA CGATCCTGCA ATTTTGGGAC TTGGTGTAAA ACCAGGTGAT
ATGATAAAGA TCACAAGAAA AAGTCCAACT GCCGGTGAAG GTCTCTATTA TAGATACGTG
GTGGAAGTAT AG
 
Protein sequence
MATKKNQILV PDHIYVPKHE IISKTEAEEV LKKYNCKPTE LPLIFVNDPA ILGLGVKPGD 
MIKITRKSPT AGEGLYYRYV VEV