Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0346 |
Symbol | |
ID | 5773056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 309252 |
End bp | 309503 |
Gene Length | 252 bp |
Protein Length | 83 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641315974 |
Product | RNA polymerase Rpb5 |
Protein accession | YP_001581680 |
Protein GI | 161527854 |
COG category | [K] Transcription |
COG ID | [COG2012] DNA-directed RNA polymerase, subunit H, RpoH/RPB5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCAACTA AGAAAAATCA AATTCTTGTA CCTGATCATA TCTATGTTCC AAAACATGAA ATCATTTCAA AAACAGAAGC TGAAGAAGTT TTAAAAAAAT ACAATTGTAA ACCAACCGAA TTACCATTAA TCTTTGTAAA CGATCCTGCA ATTTTGGGAC TTGGTGTAAA ACCAGGTGAT ATGATAAAGA TCACAAGAAA AAGTCCAACT GCCGGTGAAG GTCTCTATTA TAGATACGTG GTGGAAGTAT AG
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Protein sequence | MATKKNQILV PDHIYVPKHE IISKTEAEEV LKKYNCKPTE LPLIFVNDPA ILGLGVKPGD MIKITRKSPT AGEGLYYRYV VEV
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