Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0344 |
Symbol | |
ID | 5773495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 307311 |
End bp | 308168 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641315972 |
Product | hypothetical protein |
Protein accession | YP_001581678 |
Protein GI | 161527852 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTTA AACGTTCTAC AACATCAATG GCAATAGCCC TTTTGGCAGT GTCATTAATT TCAGTGACCT CAATTCAACA AGATGCATTT GCTCAAACAC AAGGAATGAC CCTAACAGCT ATGGCAGACA GTGGATCTAA AACAATTACC GTAACAGGTA AAACGATTTC AACATTCACT GATGTTTCAT TTACTGTAAA GTCCCCAAGT GGAAATAATG TAGTTGCTAT TGGTCAGACA ACACCAGATG CAGAAGGAAT GTTTGGTACT GAATTCAAGA TAGGCCCAAC ATGGACCGAA GATGGATTCT ATGAAATCAA AGCACAACAA GGCAGCGCAG CACTATACAC AATGGAAGTT CTTGTTGAAG TAAATGGTGG AATGGCAGAA AAAACTGCTG TGACTGAATC CAGTTATAGT TCAGATATCT TTGAACCAAT AAAACCAGTT GTTACAATAG ATGCAGGAAT TGAAATTAGT ACCGCCAAAA CTGAAATGGG ATCTGATACA ATTGTAGTTA CAGGAAATAC AGATAGAGTA AGTGCAGACA TTACATTAAC CGTAACTGCT CCAAATGGAA ATGTAGTATC AGTTGATCAA GTATCACCAA TGCTTGATGG AAAGTTTACA GCAACAATCA CAACAGGTGG ACCATTATGG ACACAAGATG GTTTTTACAC TGTTACAGCA CAACAATTTA ACGATCCAAA ATATACTGCT TCAGCTGAGG TAGATATTCA AGACGGCGTG GTAGTCCCAG AGTTTGGCAC AATTGCAGCC ATGATTCTAG CAGTAGCAAT TATCTCAATA ATTGCAGTAT CTGCAAAATC AAGACTTAGC ATTATGCCAA GATACTAA
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Protein sequence | MNFKRSTTSM AIALLAVSLI SVTSIQQDAF AQTQGMTLTA MADSGSKTIT VTGKTISTFT DVSFTVKSPS GNNVVAIGQT TPDAEGMFGT EFKIGPTWTE DGFYEIKAQQ GSAALYTMEV LVEVNGGMAE KTAVTESSYS SDIFEPIKPV VTIDAGIEIS TAKTEMGSDT IVVTGNTDRV SADITLTVTA PNGNVVSVDQ VSPMLDGKFT ATITTGGPLW TQDGFYTVTA QQFNDPKYTA SAEVDIQDGV VVPEFGTIAA MILAVAIISI IAVSAKSRLS IMPRY
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