| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0315 |
|---|
| Symbol | |
|---|
| ID | 5773745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 278371 |
|---|
| End bp | 279312 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641315942 |
|---|
| Product | mevalonate kinase |
|---|
| Protein accession | YP_001581649 |
|---|
| Protein GI | 161527823 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1577] Mevalonate kinase |
|---|
| TIGRFAM ID | [TIGR00549] mevalonate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAATCTA AAGCCTCTGC TCCTGGAAAA GTTATTCTTT TTGGAGAACA TTTTGTTGTG
TATGGAGTTA AAGCGATTCT TTGTGCAATT AACAAAAGAA TCGCAGTTAC TGCAGAAAAA
ATTGATGAAA GAAAAATTTC AATCAAATCT AATATTGGTC ACCTTGAATT AGAACCAAAC
AAACCAATTT CAGAAATTAA TTCACCGCTA AAACCATTTT ATTATTTGGC AAATAAAATA
ATTCAAGATA AAAATTTTGG AATCAAGATA GACGTTGAAT CAGAAATTCC ATTAGGTGTT
GGTTTAGGTT CATCATCTGC TTGTTGTGTA GCAGGAGCAG CTGCAATTTC AAATCTATTT
GAAAATAATT CAAAAGAAGA GATTCTAAAA CTTGCAATAG AGGCAGAAAA AACAATTTTT
CAAAACACAT CAGGTGCAGA TTGTACGGTT TGCACTTTTG GAGGATTAAT GGAGTACGAC
AAGGAAAATG GGTTTTCCAA AATAGAATCT GAGCCTAATT TTCATCTAGT TATAGCAAAT
TCAAATGTTG AACATTCAAC AGAAAGTGTT GTGGCAGGAG TAAGAAAATT CAAAAAAAAC
AATGAAGCAG AATTTTCAAA ATTATGTAAA GATGAATCAC ATCTTATTGA AAATGTATTA
GAATTGTTAA AAGAAAATAA CATTAGAGAA CTTGGTGAGA GAGTAATTAA GAATCAAGAG
TACTTGGAGA GAATTGGAAT TTCAAATGCC AAACTCAGAG AGATGATTCA AACTGGACAA
AATTCATCAT TTGGTGCAAA AATTACAGGT GCAGGAGGAG GAGGATGTAT TTTTGCCCTT
ACAGATGAAT CAAATTTAGA AAATACGATC AAAGAATTCA AAGAAAAAAA TCACGAATGT
TTTTCTGTAA AAATTGATTT CAAAGGACTG GATACTTTTT AA
|
|---|
| Protein sequence | MKSKASAPGK VILFGEHFVV YGVKAILCAI NKRIAVTAEK IDERKISIKS NIGHLELEPN
KPISEINSPL KPFYYLANKI IQDKNFGIKI DVESEIPLGV GLGSSSACCV AGAAAISNLF
ENNSKEEILK LAIEAEKTIF QNTSGADCTV CTFGGLMEYD KENGFSKIES EPNFHLVIAN
SNVEHSTESV VAGVRKFKKN NEAEFSKLCK DESHLIENVL ELLKENNIRE LGERVIKNQE
YLERIGISNA KLREMIQTGQ NSSFGAKITG AGGGGCIFAL TDESNLENTI KEFKEKNHEC
FSVKIDFKGL DTF
|
|---|
| |