Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0254 |
Symbol | |
ID | 5773142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 224986 |
End bp | 225522 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 641315877 |
Product | hypothetical protein |
Protein accession | YP_001581588 |
Protein GI | 161527762 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAAAATA TTGTAAAAGT TCTAGAATCT GGAAGTAGTG AAGAAAAAAT CAAAATTTTA GAAACACTAG ATAAAACAGA CAGTCCAGAA ATTTTAGAAA AAATCATTTC AAAATTAGAT GATGATGATA TCAAAGTACG AGGAGAAGCA TTTAGCTCAC TTGTATTAAA TAAAAATAAA ATTTCAGATT TTTTAATTCA AAATTTGAAT TCAACAAGTA AGAATATCAG AGGTTTTGTC GCACTAGCAT TAGCTAACAG AAATGAAACT GATGCGATTC CCAACATAAC AAAACTTGCG AAAGATGAAC GTTCTATGGT AAGATCATGT GCAATTGGTG CACTAAATCA TCTAAAAGCT AAAGTAGCAA AAGAAATTTT TCTAGAATCA GTTTTAGATA CAAATGTAGA AGTAAGAAAA AGTGCAGTAC ATGCAATAAT TAATCTAAAA TTTTCAATTT CTGAAGAAAG AATCAAAGAA ATTTCAAAAG ATGCAGATTC TGAATTATTG AAAATGCTTT CAAAATTAAA AAAGTAA
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Protein sequence | MENIVKVLES GSSEEKIKIL ETLDKTDSPE ILEKIISKLD DDDIKVRGEA FSSLVLNKNK ISDFLIQNLN STSKNIRGFV ALALANRNET DAIPNITKLA KDERSMVRSC AIGALNHLKA KVAKEIFLES VLDTNVEVRK SAVHAIINLK FSISEERIKE ISKDADSELL KMLSKLKK
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