Gene Nmar_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0254 
Symbol 
ID5773142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp224986 
End bp225522 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content27% 
IMG OID641315877 
Producthypothetical protein 
Protein accessionYP_001581588 
Protein GI161527762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAATA TTGTAAAAGT TCTAGAATCT GGAAGTAGTG AAGAAAAAAT CAAAATTTTA 
GAAACACTAG ATAAAACAGA CAGTCCAGAA ATTTTAGAAA AAATCATTTC AAAATTAGAT
GATGATGATA TCAAAGTACG AGGAGAAGCA TTTAGCTCAC TTGTATTAAA TAAAAATAAA
ATTTCAGATT TTTTAATTCA AAATTTGAAT TCAACAAGTA AGAATATCAG AGGTTTTGTC
GCACTAGCAT TAGCTAACAG AAATGAAACT GATGCGATTC CCAACATAAC AAAACTTGCG
AAAGATGAAC GTTCTATGGT AAGATCATGT GCAATTGGTG CACTAAATCA TCTAAAAGCT
AAAGTAGCAA AAGAAATTTT TCTAGAATCA GTTTTAGATA CAAATGTAGA AGTAAGAAAA
AGTGCAGTAC ATGCAATAAT TAATCTAAAA TTTTCAATTT CTGAAGAAAG AATCAAAGAA
ATTTCAAAAG ATGCAGATTC TGAATTATTG AAAATGCTTT CAAAATTAAA AAAGTAA
 
Protein sequence
MENIVKVLES GSSEEKIKIL ETLDKTDSPE ILEKIISKLD DDDIKVRGEA FSSLVLNKNK 
ISDFLIQNLN STSKNIRGFV ALALANRNET DAIPNITKLA KDERSMVRSC AIGALNHLKA
KVAKEIFLES VLDTNVEVRK SAVHAIINLK FSISEERIKE ISKDADSELL KMLSKLKK