| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0183 |
|---|
| Symbol | |
|---|
| ID | 5773585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 166329 |
|---|
| End bp | 166760 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641315800 |
|---|
| Product | cytochrome c oxidase subunit II |
|---|
| Protein accession | YP_001581517 |
|---|
| Protein GI | 161527691 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.13824 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGGAC ATTCTAACTG GCCTGAATGG ATTTACGTTG GTGTTGTAAT TGCTATCATG
TGTTGGGTTG GTGCTGAAGC TTGGGAAGCA GAAAGACTAG TTGAGCATGT CCCTGAAGGT
GCTGAAATTA TCAAAGTAAC CGGACAACAA TGGTTCTGGA CTTTTGAACA TGAAGATGGT
ACTAAAGAAA TTGGTGAATT ACATGTTGAA AAAGGCAAAG CCTACAAATT TGAAATTCAT
TCAACTGATG TAAATCACTC TTTTAACATT CACGATTATG TTGTTTTAAT GGATGCAATT
CCTGGTAGAG TTAACACTGT ATGGTTTGCA CCAACTGATG TTGGAGAACA TGATATTCAA
TGTAGAGAAT ATTGTGGATT AATTCACTAT AACATGCGTG GAACGTTAAT TGTGGAGGAA
CCACACTCTT GA
|
|---|
| Protein sequence | MGGHSNWPEW IYVGVVIAIM CWVGAEAWEA ERLVEHVPEG AEIIKVTGQQ WFWTFEHEDG
TKEIGELHVE KGKAYKFEIH STDVNHSFNI HDYVVLMDAI PGRVNTVWFA PTDVGEHDIQ
CREYCGLIHY NMRGTLIVEE PHS
|
|---|
| |