Gene Nmag_4170 details

Gene Information

• Locus tag: Nmag_4170
• ID: 8828904
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013924
• Strand: +
• Start bp: 214449
• End bp: 215093
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 50%
• Product: Rhomboid family protein
• Protein accession: YP_003482245
• Protein GI: 289937643

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.303634
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGGGG TGTTACGGCG TTCCCAAGCA ACTGTGTTGT TTTTGGTGAC AGTCTGGGTA 
TTGTATGGGC TCAGGTTGGG AATTGAATCC CTCTACGGCA AGGAGATTGC CCTTTCACTA 
TTCGCAGTAC ACTTCTCTCA CCTAGAGTAT GTATGGACCT GGGTGACTGC GCCCCTTGGC 
CACGGCAATC TCGCACATTT ATTGTTCAAC AGTTGGCTTG CATTGTTTAT TATCCCACCA 
GTTGAACGGG TCTTAGGGAC CACGAAGACG GGCGTGGCTT ACATTGTGGG TGGAGCACTC 
TGTGCTATCA TCGGGACCGT ACTGGTCGTA TTCGTCCGTC TCCCGTTCCT CCCTGATGCG 
ACTACTTCTG GTGGGATAGG GTCAAGTATT GGATTGTTCG TTCTCTTGGG GTTGAGCCTT 
CGCCACTACT GGTCGTATCA GAACCCACCG TTGGCAGAGA GCGGCATTGA TATGAAAAAT 
TCCACGTTTT TCAGCATACT GTTAGTGATC AGTCTCGGTG GGGTTGTATT CGATATCTGG 
CGGAAATCAG TCGGATTGGC ATTTCCTGGA CTGGGCCATC ACTATCACGC TGTCGGGCTT 
GTGCTCGGAG CGTTGATCAG CGACGTGATT TCAATACAGA ATTAA 

 

Protein sequence

MIGVLRRSQA TVLFLVTVWV LYGLRLGIES LYGKEIALSL FAVHFSHLEY VWTWVTAPLG 
HGNLAHLLFN SWLALFIIPP VERVLGTTKT GVAYIVGGAL CAIIGTVLVV FVRLPFLPDA 
TTSGGIGSSI GLFVLLGLSL RHYWSYQNPP LAESGIDMKN STFFSILLVI SLGGVVFDIW 
RKSVGLAFPG LGHHYHAVGL VLGALISDVI SIQN