Gene Nmag_3886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_3886 
Symbol 
ID8826756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013923 
Strand
Start bp281538 
End bp282983 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content62% 
IMG OID 
ProductMATE efflux family protein 
Protein accessionYP_003481989 
Protein GI289583579 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTCGGT TCCCGAATCC GCTGCGGCTG ACGATCCTCT ATATCGGTCT CGCTCTCGCG 
CGCCTTGGGT TGATAGATCG CGAACGCGCC ATCCGGACGA CCGTGCTCGC CTGGCCGCGC
ATCATCACTG GTATCGCTCG CATGTCGAAA AGTGCCGTCG ACGTCGCGAT GGTCGGCGTT
GCAGTCGGCA CCTCAGCAGT TGCAGGTGTT GGCTTTGCGG GTCCCTTCTG GGGGCTTGCC
TTCGCGATTG GCGGCGGTGT CGCCGGCGGG ACGATTGCAC TCGTCTCCCA GCGGTACGGT
GCTGAAGCCT ACGAGGAACT CGGACTCGCC GTCCGCTCGA GTACACTGCT CGTTCTCGTG
ATCAGCCTCC CAGTGCTGGG ACTGTTCTGG ACGTTTCCAG AAGAGTTCAT TTCGCTGATC
ACCAATAACG AGGCGGCGAT CAATCACGGG GCGACGTATC TGCAGTACGT GGCACTCGGG
ATTCCGTTCG CGGGGCTCAA CCTCGTCGGC AGCCGCGTCC TGGTTGGAGC AGATGACTCC
TACACGGCAA TGCAGGTTCG TGCCGGCGGT GCGGTTCTCA ACATCATCTT GAGCGCGGTG
TTTATCTTTG GGCTCGACCT GGGTGTCGCC GGCGCTGCCG CCGGAACCGT CCTGGCAAAC
CTCGCAGTGA CAGCAGGGTT CGCTATCGGC CTCAGTTACG GGACACTCCC TGGCGTCGGC
GACTTTCCGG TTAAAATCGA CCCGTTCGGT TCGTATCTCG ATCCAGAGAC CATTCGAAAC
ATCGTCAAAA TCGGGCTCCC CGTGGGTGGC CGAAACCTCG TCTGGGTCGT CGCCGAATTC
CCCATGCTCG GGATCCTGAA TATCTTCGGC GAGAATACAG TCGCCGCGTT CGTTATCGCC
CGCCGGATCT GGGGTATCAT GAACACGCCC GGCTGGGGCT TCGGCCTGGC ATCCTCGAGT
CTGGTCGGCC AGGAACTTGG CCAGAACAAC GAACAGTTGG CAGAGGCGTA CGGTCGCGAT
ATCATTCGCT TCGCTGTTGC CACGTACATC GTCTCGGCGA TCGTGATCGC GCTGTTCGCC
GACCAGATCG TCGTCCTGTT CGCGGACGAC CCAACCAGTG CGGAAATTCC GATCGCCACG
GACCTCGTCT ACGCGGCCTG TGTCGCCGTT GTCTTCCAGG GCGTCGCCGG TGCCGCCGCC
GGGCCGCTCG ACGCAAGTGG TGATACGAAC GTACCGTTCG CCAGTCAGTT CATCGGGATG
TTCCTCGGAT CGATCCCGCT CGCGTACCTT GGTGCGACCA CATCACTGGG CTACTGGGGG
CTGTACCTCG CCTTCATCGC AGAGACAACG ATCCCCGCGG CGATCAACTA CTGGCGTTTC
CGGACGGACA AGTGGAAGTC TATCAGCCAG ACGTACCGTC CGGATGCTGC AGTCGCCGAC
GACTAG
 
Protein sequence
MTRFPNPLRL TILYIGLALA RLGLIDRERA IRTTVLAWPR IITGIARMSK SAVDVAMVGV 
AVGTSAVAGV GFAGPFWGLA FAIGGGVAGG TIALVSQRYG AEAYEELGLA VRSSTLLVLV
ISLPVLGLFW TFPEEFISLI TNNEAAINHG ATYLQYVALG IPFAGLNLVG SRVLVGADDS
YTAMQVRAGG AVLNIILSAV FIFGLDLGVA GAAAGTVLAN LAVTAGFAIG LSYGTLPGVG
DFPVKIDPFG SYLDPETIRN IVKIGLPVGG RNLVWVVAEF PMLGILNIFG ENTVAAFVIA
RRIWGIMNTP GWGFGLASSS LVGQELGQNN EQLAEAYGRD IIRFAVATYI VSAIVIALFA
DQIVVLFADD PTSAEIPIAT DLVYAACVAV VFQGVAGAAA GPLDASGDTN VPFASQFIGM
FLGSIPLAYL GATTSLGYWG LYLAFIAETT IPAAINYWRF RTDKWKSISQ TYRPDAAVAD
D