Gene Nmag_3878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_3878 
Symbol 
ID8826748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013923 
Strand
Start bp274510 
End bp275658 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content59% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003481981 
Protein GI289583571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTCTA TCACACTGGA CACGGTTCGC AAGCAGTTCG GTGACGTCGT CGCAGTCGAG 
GACGTCGATC TGGAAATCGA AGACGGCGAG TTCATCTCGA TCGTGGGACC GAGCGGGTGT
GGAAAGACGA CGACGTTGCG GCTAGTTGCC GGTCTCGAAC AGCTCACGAG TGGGCGCATC
TTCTTCGGCG ATACGGACGT GAGTAACACG CCCGCGAAAA AGCGCGGGAT CGGCATGGTG
TTTCAGAATC TCGCGCTCTA CCCGCACATG AGCGTCCGCG AGAACATGGA GTTCGGACTC
TCCGTCGCCG ACGTCCCCCA GGAAGAGCAA GACGAGCGGA TCATCAAGAT CGCCGAGATG
CTCGACATCG CGGAGTTGCT CGACCGTGAA CCGAGTGAGC TGTCGGGCGG CCAACAGCAA
CGCGTCGCGA TCGGACGAAC GATGGTACTC GAGCCGAACG TCTTCTTGCT GGACGAGCCA
CTTGCGAGTC TGGACGCGAA ACTCCGCGTC GAGATCCGAG AGGAGTTACA GGAACTCCAG
AAGGAAATCG GCGTGACGAC GATCTACGTG ACCCACGACC AGGAGCAGGC GATGACGATG
AGCGATCGAG TGATCGTCAT CAACGACGGC GAAGTACAAC AGTTCGCGAC GCCAGAGGAG
ATTTACAACG AACCCGCAAA CAGGTTTGTC TCACACTTCA TCGGAACGCC ATCGATGAAC
TTCGTCGACG CACAGCTTTC CGCGCCGAGC GATTCACTGA CGGCAGACTT CGGGTCGGTA
CAGGTCGATC TCGAGCGGCC GGCCGACGGT TCGCCGGAAC TCCTCGACAG AGACGCAACA
CTTGGGATCC GACCGGAACA CCTGGAGCTT TCGACGACTG AAGAACCGAC GGGGACAAAC
ACGGCCCTCG CACAGGTTCG AATCGTCGAG CACACGGGGG CGAACAAGAT CGTCCACCTC
ACGATCGACG AGCGCGACTT CACGGCGCTG GTTCCCGAGT CGACGAACGT ACAGAGCGGC
GACGAGGCCA CCGTTCGATT CCCGTCCGAG AACGTGTATC TATACGATAG CGAGTCAGGT
GATCGACTCT ACTACCGCTC TTCGATCGAT TCGCACCACT CCACGCGAGA AATCGAAAAC
AAGAGCTGA
 
Protein sequence
MASITLDTVR KQFGDVVAVE DVDLEIEDGE FISIVGPSGC GKTTTLRLVA GLEQLTSGRI 
FFGDTDVSNT PAKKRGIGMV FQNLALYPHM SVRENMEFGL SVADVPQEEQ DERIIKIAEM
LDIAELLDRE PSELSGGQQQ RVAIGRTMVL EPNVFLLDEP LASLDAKLRV EIREELQELQ
KEIGVTTIYV THDQEQAMTM SDRVIVINDG EVQQFATPEE IYNEPANRFV SHFIGTPSMN
FVDAQLSAPS DSLTADFGSV QVDLERPADG SPELLDRDAT LGIRPEHLEL STTEEPTGTN
TALAQVRIVE HTGANKIVHL TIDERDFTAL VPESTNVQSG DEATVRFPSE NVYLYDSESG
DRLYYRSSID SHHSTREIEN KS