| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_3555 |
|---|
| Symbol | |
|---|
| ID | 8826423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | - |
|---|
| Start bp | 3692129 |
|---|
| End bp | 3693814 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003481667 |
|---|
| Protein GI | 289583201 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.779432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGTA CACACGAGTG GCCGACGCGG GATCTGCTCT CACATCGTGC GGCCGCGACG
CCCCAGCAGC CGGCACTGAT CGACGTCGAC ACCGATACCG ACACCGAGTG GACCTACGCC
GAGTTCGATC ATCGGGTCGA TCGGATTGCA GCAGCACTCG AGTCCGACTC CGTCGTCGAC
CGCGGCGGCC GTCTCGGGAT CCTGATGGAC ACCCGTCCCG CCTTCGCGAC GCTCTTTTTT
GCGGCGATGC GCCTCGGCGT GACCGTCGCG CCGCTGAACG TCCGAGAGAC GACCGACGAG
TTAGCTGTAA AGATCGATCG ACTCGACGTC GACGCGCTGG TCTGTGAGGC CGATACCGAA
TCGACCGCGG TGGACCTCGG GACCAAGGCG AACGCCAAGC GGCTGCCCAC CTACTCCGTC
GACGAGCCGA CGACTGAGGC GACCGACGTG TCGGCGCTAT CGTCGGTCGT CGACTGGGAG
AGTGACGGAC CGGAATCAGC CGGGCCAACC AACACGACTG GCCCAACCAA GACAACTGCC
ACTCCAGACG CAGCAACCGA CACCACTCCG TCCATCGAAC CAGTCGCACT CGAGTCCGAC
CACGTGCAAC TGCTCATGTT TACGTCGGGG ACCTCTGGCG AACCAAAGAT CGTCCAGGTG
ACGGTCGGCA ACCTCGTTGC GAGCGCGACG GCCTCTGCGT TCCGACTGGG CGTCGCGCCC
TCGGATCGGT GGCTCTGCTG TCTCCCAATG TATCACATGG GCGGCGTTGC GCCGGTCATC
CGGTCGACGC TGTACGGAAC GACTGCGGTG ATCCAGCGAA CGTTCGACGA ACGCGAGACG
GCTTGCGTGC TGGACGAGTA CGATATTTCG GGTGTTTCAC TGGTCCCCAC GATGTGCAAG
CGCCTGCTCG ATGCTGGCTG GGAGCCGACC GACTCGCTCC GATTCGTTCT TCTGGGCGGG
GCACCCGCCT CGACGGACTT CCTGGCGCGC TGTCGTGAAG CTGGTGTGCC GGCCTACCCG
ACCTACGGCA TGACAGAGAC GGCCTCCCAG ATTACGACCG CGACGCCGGC GCAGGCCGCC
GCTCACGAGG GGACGGTCGG CCAACCGCTC GTCGTCACCG ACGTGTCGAT CGTGGATGTG
GACGGCGAAC CGGTTCCAGC GGGCGAGGCG GGCGAAACCG TCGTCTCCGG CCCGACGGTG
ACGCCAGGCT ACCTCGACGA GACGCGCACA GCAGACGCGT TCTGCGACCG CGGCCTTCGG
ACCGGCGACG TGGGCTACCG GGACGAGGCG GGCCGACTGT GGATTCTCAA CCGGCGCAGC
GACCGCATCG TCACCGGCGG CGAGAACGTC GACCCCGGCG AAGTGATCGA TGTCTTGTGC
GCCCAGCCAG CCGTCGAGGC AGCCGCCGTC GTCGGCCTCG AAGACCCGGA CTGGGGCGAG
CGTGTGAGCG CGCTGGTCGT CCCTGCAGAC ACGAGCGGGT CGGAATTGGG TCCTGATTTG
GACTCTGACG CGGAGATACT CGAGTCCCTC CGCGCTCACT GCACCGACAA CCTGGCAGGA
TTCAAGTGTC CGAAGACGAT CGGCGTGGTC GAGGAACTCC CGCGAACCCA CTCGGGAACG
GTCGATCGGG AAGCGGCCCG CGAGCGGTTG CTCGCGGTCG GTGTCGACGT GACGACATCC
CAGTGA
|
|---|
| Protein sequence | MIGTHEWPTR DLLSHRAAAT PQQPALIDVD TDTDTEWTYA EFDHRVDRIA AALESDSVVD
RGGRLGILMD TRPAFATLFF AAMRLGVTVA PLNVRETTDE LAVKIDRLDV DALVCEADTE
STAVDLGTKA NAKRLPTYSV DEPTTEATDV SALSSVVDWE SDGPESAGPT NTTGPTKTTA
TPDAATDTTP SIEPVALESD HVQLLMFTSG TSGEPKIVQV TVGNLVASAT ASAFRLGVAP
SDRWLCCLPM YHMGGVAPVI RSTLYGTTAV IQRTFDERET ACVLDEYDIS GVSLVPTMCK
RLLDAGWEPT DSLRFVLLGG APASTDFLAR CREAGVPAYP TYGMTETASQ ITTATPAQAA
AHEGTVGQPL VVTDVSIVDV DGEPVPAGEA GETVVSGPTV TPGYLDETRT ADAFCDRGLR
TGDVGYRDEA GRLWILNRRS DRIVTGGENV DPGEVIDVLC AQPAVEAAAV VGLEDPDWGE
RVSALVVPAD TSGSELGPDL DSDAEILESL RAHCTDNLAG FKCPKTIGVV EELPRTHSGT
VDREAARERL LAVGVDVTTS Q
|
|---|
| |