Gene Nmag_3197 details

Gene Information

• Locus tag: Nmag_3197
• ID: 8826060
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: +
• Start bp: 3314457
• End bp: 3315212
• Gene Length: 756 bp
• Protein Length: 251 aa
• Translation table: 11
• GC content: 68%
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003481309
• Protein GI: 289582843

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAGCC TCGCGCTTTC GATCCGGCAG GACGACTGCC CACTGAGCGC GGCCAGCGAC 
GCCCACGACG TCGCGTTCGT CACTCCACAC TGGCACTACG ACCACGACCG CTCCCAACTC 
GAGTTGCGCA TCCTCGCAGA CGCCGCCGAC CGGACCGCAC TCGAGTGCGG ACTGGACGTG 
ATCCGCGCGC ACCCCGAGAC GGACGCCTTC AATTTGCTCG CAAAGCAGGG CGGAACCGCG 
CGCGTCCACC TGACGATGGG GACGACCGTG ACGATGGGCA CCGTTGTCGC GAACGGGGGC 
TATCTCACTG CCCCCTTCGA GAACGTCGAC GGCCGCGAGC GCTGGCAGCT TGGCTTCGAC 
GATGAGCGCG CTGCCGAGCA CACGCTGGCC GTCCTCAGCG AGCACGACGA CGAGTTCGAG 
GTCCACGAGC GTCAGCGCCT CGACCCCGAG ACGGTACTCG CGGACGTGCG CGCCGACGCG 
ATCGGTACCA CCGTCCTCGA GGGCGCGCGA CGACTCACGA ACACCGAGCG CGAGACTATT 
CGCCGGGCCG TCGCTGGCGG CTACTATTCG GTCCCGCGGA CGGCGACGCT CGGTGACCTC 
GCGGCCGATC TCGGCGTTTC GGACGCCGCC GTCTCGAAGA CGCTCCGGCG CGCCGAACAG 
AAGTTATTGG CGCCGATGGT GGGGGTACTC GAGTCCAGCC CGGAATCCCG AAGTGGTCGA 
CTCGGCTGGC CAGAGAGTGA CTGCGAGCAG ACGTGA 

 

Protein sequence

MISLALSIRQ DDCPLSAASD AHDVAFVTPH WHYDHDRSQL ELRILADAAD RTALECGLDV 
IRAHPETDAF NLLAKQGGTA RVHLTMGTTV TMGTVVANGG YLTAPFENVD GRERWQLGFD 
DERAAEHTLA VLSEHDDEFE VHERQRLDPE TVLADVRADA IGTTVLEGAR RLTNTERETI 
RRAVAGGYYS VPRTATLGDL AADLGVSDAA VSKTLRRAEQ KLLAPMVGVL ESSPESRSGR 
LGWPESDCEQ T