| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_1984 |
|---|
| Symbol | |
|---|
| ID | 8824826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | - |
|---|
| Start bp | 2017926 |
|---|
| End bp | 2019452 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
|---|
| Protein accession | YP_003480117 |
|---|
| Protein GI | 289581651 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.043635 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAGCG CGTTCACGCT CGATAGACGG CGATTCGTAC AGGCAACGGG ACTAGCAGCG
GTTACGGGGC TGGTAGCAGG GAGTCAGGCC AGCGCCGCGG ATGAGGGGGA AGAAGAACAG
ACAGAGGAGA GCGACCAGGA GCAGCAAGGC GAGCAGACTC AGCAAGCCCA CCAGGGACCA
CCGGTCGACG CCGGCGACGT GTTCGACCAT CTCGATCAGG CAGCAATCAG TGTCTTCGCA
CGCGACATCG AAACCGGGGA CGTAATCGCT GATAGTGGAT CCGAACGGCC CGTTCAGCCG
GCGTCGACGG CGAAGCTGTT GACCACTGCG GCCGCGTTCG ACGAACTCGG CCCCGACTAT
CGGTACGAGA CGACCGTCGG CGTCGTCGGC GACCGCCGAA ATCAGCGCGT CGTCGAATCG
CTCGGCGTCG TCGCCAGCGG CGATCCGGAT CTCACGGCGT CGGATCTCGA AGCACTCGCA
GCAGCCGTCG CCGACGCCGG CATCGAGCGC GTCACCGATC GACTCGTCGT CGACGTCTCC
GCGTTCGACG ACGGTGAGTA CCCGCCAGCA TGGACGCTCG GCGACGCGGT GAACACGTAC
GGCTCGAAGA GTTCGGCGTT CGTCGTCAAC CACAACGAGG CCGAAATAAC GGTCTCTCGG
CAGGGTGACA CCTGCGAGTT CGAACACACG GTCGAACCCG ACTCGGGGCT CGTCGATGTC
GAGATCGAAC TCGAGTGCGT CGACAGCGAC CGGTTCGTGA CGATAACGAC GCCCAACCAC
TGGACAAATA CAGCCGAGGT GAACGGGCGG ATGGTGCCGG ACGACGAGGC GACGGCGTCG
GTCCCGGTTG CCACGCCGAA CGAGCACGCT GCGAGGGTCT TCGCGCGGGC GCTCGCGGAC
GAGGGCGTCG AGATCACGCC GGGTGGCGGC GGTCCGGAGC CCGAAATCGA GATCACTGAC
GTGCCGATCG AACTCACAGA GGAGGTGGCG ACTCACGAGT CGGCACCGCT GTCCGACATT
GCGGAAGGGG TCAACCACTG GTCGTACAAC ATGGTTGCGG AGAACATCGC CAGAACGGTT
GCCTACGAGC GCGAGGGAAC CGGAAACGGC TCCTGGTCTG TCTGGGAGGC GTATCTCGAC
GAGACGCTCG CGGCGGCCGG CGCGGAGACG CCACAGATCC GCGACGGTTC CGGGCTGTCC
AGACACGACC TGGCTTCGGC GCGCGACGTG GTCTCGATGA TCGAGTGGGG ACTCGACGCC
GACTGGGGCG AGGAGTTCTA CGGGACGATG GCAGTCGCCG GCGAGGACGG CACACTTCGG
AACCGGCTCG GAGATGTCGA CGCGACGATT CGTGGGAAAA CCGGCTCGCT TCGCGGCGTA
ACGTGTCTCG CGGGCGTCAT CGAAGACGAC GGCGAACCCG CGACGAGTTT CGCGGTACTC
GCGGCGAATC TAACGGGCGA ACGGGCCAAC GGTGCGTCAC CACGAGTGGA CGAACTCGTC
ACAGCGATCG CTGAGGAAAG CGGCTGA
|
|---|
| Protein sequence | MFSAFTLDRR RFVQATGLAA VTGLVAGSQA SAADEGEEEQ TEESDQEQQG EQTQQAHQGP
PVDAGDVFDH LDQAAISVFA RDIETGDVIA DSGSERPVQP ASTAKLLTTA AAFDELGPDY
RYETTVGVVG DRRNQRVVES LGVVASGDPD LTASDLEALA AAVADAGIER VTDRLVVDVS
AFDDGEYPPA WTLGDAVNTY GSKSSAFVVN HNEAEITVSR QGDTCEFEHT VEPDSGLVDV
EIELECVDSD RFVTITTPNH WTNTAEVNGR MVPDDEATAS VPVATPNEHA ARVFARALAD
EGVEITPGGG GPEPEIEITD VPIELTEEVA THESAPLSDI AEGVNHWSYN MVAENIARTV
AYEREGTGNG SWSVWEAYLD ETLAAAGAET PQIRDGSGLS RHDLASARDV VSMIEWGLDA
DWGEEFYGTM AVAGEDGTLR NRLGDVDATI RGKTGSLRGV TCLAGVIEDD GEPATSFAVL
AANLTGERAN GASPRVDELV TAIAEESG
|
|---|
| |