Gene Nmag_1971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_1971 
Symbol 
ID8824813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013922 
Strand
Start bp2002541 
End bp2003191 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003480104 
Protein GI289581638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTCAG CAGACCTCAC GCTCCGCCTC CCCCCGTCGA TGCAGTTGCC AGGACCCGAG 
GGCCTCACAG CGTTCCAGCG CGAGGAGGTG CTCTCCTGGG AGGTCGATCC CGAAGCCGGC
ACCGTTCGCT TTCTCTCGCT AATCGTCGGT GATGTCGGAG CACTCGGAAC GCTGGCCGAC
GAGCTCGACG CCGTTCACCG CTACGATGCG ACACCCATCG ATGACGACGC CTTCTACGGC
TACGTCGAGA TGGACCTGCG GGCCGCCGAC GCCACGCTGC TGGGAACGTT CGATGTCCCC
GGTCTGGTGA TCGTCCCGCC GATGGTCTAC ACGGGGCGAC AAAACGCCCG CATCACCGTG
CTTGGCGAAC CAGAAGCGAT GTCGCAGCTG CTCGAAAGAG CGCCGGACGG TGTCGAGATC
GAGGTCGAGC GCATAAGCGA GCACCAGCGC CGCTCGGAGA CGCTGGCCGG TCGGCTCACT
GCCAGACAGT TCGAGGCGCT CACGGTCGCC CGCAACGCGG GGTACTACGA CGTGCCACGG
AGTGGCGACC TTGCAACGGT GGCAGCCGAA CTCGAGTGCT CGGAGAGTGC GGCCTCGACG
TTGCTCCGAA CGGCGGAGTC GAAACTGGTC GATGCTGCAG TGCAACGATA G
 
Protein sequence
MQSADLTLRL PPSMQLPGPE GLTAFQREEV LSWEVDPEAG TVRFLSLIVG DVGALGTLAD 
ELDAVHRYDA TPIDDDAFYG YVEMDLRAAD ATLLGTFDVP GLVIVPPMVY TGRQNARITV
LGEPEAMSQL LERAPDGVEI EVERISEHQR RSETLAGRLT ARQFEALTVA RNAGYYDVPR
SGDLATVAAE LECSESAAST LLRTAESKLV DAAVQR