| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_1556 |
|---|
| Symbol | |
|---|
| ID | 8824390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | + |
|---|
| Start bp | 1587997 |
|---|
| End bp | 1589811 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_003479694 |
|---|
| Protein GI | 289581228 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAC CCGACCCTGA TTCCTCGTTC TCCTGTGACC CCCGCCTGCC CGGCGAGCCG
ACTCCCGTCT GGCTCGCGGA GCCGGCCGAC GCGGCACTCG ATGAGCCACC GGCGGATGCG
ACTGGCGGCC CAGTCGACGA GTCAGCCGAT GAATCCGTAC CCGCGCTCAC AACAGACCAC
ACCGTCGACG TCTGCGTCGT CGGCGCTGGC ATCGCCGGCC TCTCGACTGC ACTCGAGTTA
CGCGAGCGTG GGAAGACGGT TGCGGTTCTC GAACGTGACC GGATTGCAGC GGGTATCACG
GGGAAGTCGA CGGCAAAGTT GACGAGCCAG CACGGAGCGA TCTACGACTA CCTGCGCCGG
GAGTTCGGCC GGCGAGAGAC GAAGCAGTAC GCGGCGGTAC AGGAGGAGGC AATCGACGCG
GTCGAGCGCC GGATCGAGGA GTTCGGGATC GACTGCGGGT TCGAGCGCCA GCCCTCGTAC
CTCTACGGAA ACGATCGAGA TACGATCGAA CGCGAGGCCG ACGCCGCCAA GCTCGCGGGA
TTGCCAGCAA CCTTCGTGAC CTCGGTACCG CCGTTCGAGC GGGCCCAGGC CGCAGTTCGC
TTCGACGATC AGGCGTGGTT CCACCCGCGC CAGTACCTCC TCGGAATCGC GGACGTACTG
CAGGAGGACG ACGGCGCGGC CGTCTACGAA GGAACCCGCG TGACGGACGT CGAGTCCGGC
ACGCCGTGTC GCGTACAGAC CGAGTCGGCG ACGGTGACCG CCGAACAGGT CGTCCTCGCG
ACCGGCTTTC CGATTCTCGA CCGGGCGGGC TACTTCGCGC GGATGCACCC GAAACGATCC
TACGTGCTCG CACTCCGTCT CGACGGCGAA CCGCCCGAGG GGATGTACTA TCGGACGGGC
GACAACTACC GCTCTGTTCG GACCTATCGC GGCGCTGGAG GTGGGGAAGA CGGGAGCAAT
GGGGGAGAGA ACGACGACAG CGATAGCAGG GGCGACGGCA GCAACAATGG CGACAGCGAA
GCCCTCCTCC TCGTCGGCGG CGAAAACCAC AAAACCGGAC AGGGCGGCTC GACAGCCGAG
CGCTATCGCA CGCTACTCGA GTGGGCTCGC GAACGATTCC CCGTCGAATC GGTCGCCTAC
CGGTGGTCGA ACCAGGACTA CAAACCGGTC GACAAGGTGC CGTTCGTCGG CCGCGTCGGC
GCGGGGGCGC AGAACGTGTA CGTCGCCACC GGCTTTCGCG GCTGGGGAAT GACCAACGGC
GTCGCCGCCG GCCAACTGCT GGCGGCGCTC ATCGACGGTC GCAAACCACC TGAGCGGAAG
TTGTTCGATC CGATGCGGGT CACTCCGAAG GCGTCGGCGG GCAAGACGAT CACCGAGAAC
GTCGACGCCG TGAGCGAGTT CGCGACTGAC TGGCTCCGCG CGCTGCTCAC GCCCGAACTG
CGCTCGCTCG ACCCTGGCGA GGGGACCGTG ATCCGCAGCG GGGGGAAACC GGTGGCGTGT
GCGCGGGACG CAGACGGCGA CCTGCACGCG ACCTCAGCCG TCTGCACCCA CATGTACTGC
CTCGTCGAGT GGAACGACGC CGAATGTAGC TGGGACTGTC CCTGCCACGG CTCGCGGTTC
GCGCCGGACG GGGAGGTGCT TCAGGGGCCG GCGAACGAGG GGCTCTCGAG TGCCAGTATC
GATGATGGTG GAGGAGGTGG TGGTGTGGGT GATAGCGCAG GTGCCGAAAC GGGCGTGAGC
ATCGACATCG ACAGGGGTGG AGTCGGTAGC GGGAGTGGAA GCGAGGAGCG GGACGGAGGA
GAGGGCGAGG ATTGA
|
|---|
| Protein sequence | MTAPDPDSSF SCDPRLPGEP TPVWLAEPAD AALDEPPADA TGGPVDESAD ESVPALTTDH
TVDVCVVGAG IAGLSTALEL RERGKTVAVL ERDRIAAGIT GKSTAKLTSQ HGAIYDYLRR
EFGRRETKQY AAVQEEAIDA VERRIEEFGI DCGFERQPSY LYGNDRDTIE READAAKLAG
LPATFVTSVP PFERAQAAVR FDDQAWFHPR QYLLGIADVL QEDDGAAVYE GTRVTDVESG
TPCRVQTESA TVTAEQVVLA TGFPILDRAG YFARMHPKRS YVLALRLDGE PPEGMYYRTG
DNYRSVRTYR GAGGGEDGSN GGENDDSDSR GDGSNNGDSE ALLLVGGENH KTGQGGSTAE
RYRTLLEWAR ERFPVESVAY RWSNQDYKPV DKVPFVGRVG AGAQNVYVAT GFRGWGMTNG
VAAGQLLAAL IDGRKPPERK LFDPMRVTPK ASAGKTITEN VDAVSEFATD WLRALLTPEL
RSLDPGEGTV IRSGGKPVAC ARDADGDLHA TSAVCTHMYC LVEWNDAECS WDCPCHGSRF
APDGEVLQGP ANEGLSSASI DDGGGGGGVG DSAGAETGVS IDIDRGGVGS GSGSEERDGG
EGED
|
|---|
| |