| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_1427 |
|---|
| Symbol | |
|---|
| ID | 8824260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | - |
|---|
| Start bp | 1458808 |
|---|
| End bp | 1460343 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF95 transmembrane |
|---|
| Protein accession | YP_003479568 |
|---|
| Protein GI | 289581102 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTCT CTGACTCCGT CACCGCCGTC GTCGCAGCGT TCCGGCGTCG TCCGGGGGAT
CTGCTTCCCG TGTACTTCCT CGGGGCCGCA CTCCCCGCGA TCATCCGGGT CGTTCCCATG
ATCGCCGCGC TCCTCGGCGT GCTCTACCTC GCGCTCAGCG GTCGACTCGA GTCCATCCTC
ACGTTCGTCG AGGAGACCGA CCCGGGAGCC ATGCCTGGCC CCGAGGCCAG CGAGGAGGCC
GTCGAACAGT GGGTGACCCA GTTCGAACCG CTCATCGAGT TGCTCGCCAC GCCGACGATG
GCCCTGTTAG TTCTCGGAAC GATCCTCATC ACGGTCGTCC TCTCGTTCGT CCTCTACGCC
GTCGCCGCGG CGGCACAGCT GAGTGCCTGC TACGGCCGCA CTCGCAACGA CCGCGGGCTG
ATCGCTGCCC TCGCGGGCGC TCGCCGCTAC TGGCTGCGCT TGCTCGGGTT GGTACTCCTC
GAACTCGTCC TCTGGATTGG CATCTTCGGG ATGGCTAGCA TCGGTCTCGT CGCGACCGTC
GGGACTATCA CGGCGCTCAC CGGCGCATCG GTCGTCGCCG CACCTGCCGT CCTCCTCGCA
GTCCTCCTCG TCGCTGCTCT CCTGGCCGTG ATCCGCGCAC TGTTCGCGTT CGCACCAGTC
GCCGTCGTTG CCGATGATGC GGGCGTGCTG GGCTCGCTCT CGAGTACCGC CGGCTTCATC
CGCGCCCGGC CGGTTGACGC GGTGTTCTAC TACGTGCTTT CGATCGGATC GTTCCTCGTC
GTCGGGGTCA TCTCGAGTAT CCTGCTGCTC GTCGACGTCG TCGCGTTCAT GTCGCTCGTG
ACGATGATCG TCCTGCTGCC GGCGCTCGAC CTGCTGAAGA TGGCACTGTA CGTCAACTAC
CGTGGGCGAC TCGAACCGCC AGCGATGCCC GAACAGTCCC TCTGGACCCA GTTCCGCGGC
GGCGTTGGTC GCGGCTGGCG CGAGATGGTG GCCTACGTCC GCGACACGCC GCTGCTCCAC
GCGGCGGTCG TCGTTCTCGC AGTTGCCAGC TTCTGGATCG GCTGGCGTGC TGGCGCGCCG
CTGGTCGACG CCGGCATCGA GACCTCGATC GCGGCCCGAC TCGAGGGACA CGTTGCGCCG
GCGGCCGCAC TCGAGTTCTT CGGCAATAAC TGGATGGTCG CGATCACGAC GGCGTTTAGC
GGTATCGCGC TCGTTATTCC GGCGATCGTC TCGCTGGTGT TCAACGGCGT CTACATAGGT
GTGATTGCGC GCACGGAAGC CGAACTGATG GAGCTCGTCG CCTTCGTGAT CCCGCACGGA
ATCTTCGAGA TTCCGGCGAT TTTCATCGCG ACTGCGGTCG GAGTCACGCT GGGACTGACG
GGGTGGCGGG CCTTCCGCGG ACGGACCACA CGGGTCGCGT TTGCGGACGA ACTCGAGCGG
GCGTTCTGGG TGCTCGTTGG TGTCGGACTC CTGCTCCTGA TTGCGGGTAT TATCGAAGGG
TTCGTGAGTC CGTACTACTA CGACCTGCTG TTATAG
|
|---|
| Protein sequence | MSLSDSVTAV VAAFRRRPGD LLPVYFLGAA LPAIIRVVPM IAALLGVLYL ALSGRLESIL
TFVEETDPGA MPGPEASEEA VEQWVTQFEP LIELLATPTM ALLVLGTILI TVVLSFVLYA
VAAAAQLSAC YGRTRNDRGL IAALAGARRY WLRLLGLVLL ELVLWIGIFG MASIGLVATV
GTITALTGAS VVAAPAVLLA VLLVAALLAV IRALFAFAPV AVVADDAGVL GSLSSTAGFI
RARPVDAVFY YVLSIGSFLV VGVISSILLL VDVVAFMSLV TMIVLLPALD LLKMALYVNY
RGRLEPPAMP EQSLWTQFRG GVGRGWREMV AYVRDTPLLH AAVVVLAVAS FWIGWRAGAP
LVDAGIETSI AARLEGHVAP AAALEFFGNN WMVAITTAFS GIALVIPAIV SLVFNGVYIG
VIARTEAELM ELVAFVIPHG IFEIPAIFIA TAVGVTLGLT GWRAFRGRTT RVAFADELER
AFWVLVGVGL LLLIAGIIEG FVSPYYYDLL L
|
|---|
| |