| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_1376 |
|---|
| Symbol | |
|---|
| ID | 8824209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | - |
|---|
| Start bp | 1410097 |
|---|
| End bp | 1412370 |
|---|
| Gene Length | 2274 bp |
|---|
| Protein Length | 757 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | V-type ATPase 116 kDa subunit |
|---|
| Protein accession | YP_003479517 |
|---|
| Protein GI | 289581051 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGAC CTGAACGGAT GAGCAAGGTC TCGGTGACCG GCTCCAAGGG CGTTATGCCC
ACGGTCATCG AGACGATCCA CGAGCTGAAT CTGGTGCATC TCTCGGACTA CGACGGCTCC
TGGGAGGGGT TCGATAACGG CAACCCGATC GAGGGTGCCG ACGACGCCTC CGAGAAACTC
GTCACCGTCC GGGCACTCGA GAGTACCCTC GGGCTGTCCG AAGCGGAGGC ATCGGGCCAG
GGGACACTCG CGGAGAACTG GGAGCAGCGA CTGGAGGAGG TTCGCACGCG GATCAACGAA
CTCGACGACC AGCAAACTGA GGTTCGTGAG GAGCTCCGAC AGGTCGACGA ACGGATCGAC
CGCGTCGCGC CCTTCGCGGA ACTCGGTATC GATCTCGACC TGCTGTCGGG GTACGACACG
GTCGACGTGC TCGTCGGTGA GGGCTCGGAG GCAGAGGTTC AGGCTGCACT CGAGGCAGCC
GAGGACATCC GCGCCTACGA GACGTTCACC AGTGGTGACG TCGTCGCAAT CGTCGCTGCA
CCGACCGGTG AGATCGATCC GGTCGAAGAC GCTGGCGACG CCGACAACGT CATCGACGAC
GCGCTCGTCG GCATCGAGTT CACGCGATAC GACGTGCCGG ACACCGAACA GAGTCCGTCG
GCGTACGTCT CCGAACTCGA GGATCGCAAG TACGAACTCG AGTCCCGGAT CGACGAGATC
GACGACGAAC TCGAACGTAT CGAGCGCGAG GAGGGTTCGT TCCTGCTCCA GCTCGAGGCG
GAGCTGACCA TCGAGGTTCA GCGTGCGGAA GCGCCGCTGC AGTTCGCGAC GAGCGACCGG
GCCTTCATCG CCGAGGGCTG GGTTCCGTCC GACGAACTCG AGCGGCTCAA AACAGCCCTG
CGAAATGCGG TCGGCGACAG CCTCGAGATC GAAGAACTCG AGCGCGCGAG CTACGACCGC
CACGGTCGGA CCCATACGGA TGGCGTCCAC CAGGGAACGC AGGATGCGAA AGAAGGCGAC
GAACCGTCGG CTGATGCAGA CGAAGACGAC CAGCAACAAC AGAAGGCCGT CACGGATGGC
GGCTCTGCGG TGACGATGGG CGACGAACCG CCGACGATTC AGGATAATCC GTCGGCGGCG
AAGCCGTTCG AAATGCTGGT CCAGGCAGTC AATCGGCCGA AGTACAACGA ACTCGATCCG
ACGATTTTCC TGTTCCTGAC GTTCCCACTG TTCTTCGGAT TCATGATCAG TGACGTCGGG
TACGGGCTGC TGTACGTCCT GATCGGGTTC TACATGTACA AGGGATTCGA TAGCCCAGGA
ATCTCGAGTC TCGGTGGCGT TGCGATCTGG GCTGGCGCGT TCACGATCCT CTTCGGGATC
CTGTTCGGCG AGTTCTTCGG CCTACACGAA CTCGGCTACA TGATCTTCGG CGAGGGCGGC
GCGCCGATGG GCGATAAGGG ACTCTCACCA GCGACGGCTG ACTTCGTCTA CGCGTGGCTG
ATCGTCGCCG TTGCACTCGG TGTGATGCAC CTGAACATCG CCTGGATTCT CGACTTCATC
GAGAACATCC AGCACGGCCA CGGTCTCTGG GGTGCGATTA CCCACAGTGG CTCGTGGCTC
CTGATGCTGA ACGGGATCTG GATCTGGGTG TTTACGCCGC AGGCTGCCGG CGTCAAGCCG
GAGTTCATCT TCACGGCCTT CGACGGCCAG CCGTTCGACT TCGGCTTCAG CGGCTTCGAT
ATGATGACGG TATTCACCGT CCCGGCCGAT ATCGCCTATC TCGGCGGTTT CGAAGCCACC
TTCCCGTTCC TGATGGTTAT TGCAGGGATC GTCCTGCTCG CCATCGGTGA CCCGGTCGAA
CTCGCAGAGT TCGCGATGCC GTTCGCACAC GTCGTCTCGT ACGCCCGGAT GACGGCCGTC
CTGCTCGCAA AGGGTGGGAT GGCGTTCGTC GTCAACCTGC TGACCTTCGG TGCCTACGAG
ACGACAGACG GAAGCCGCCC GTTCGCCGCA CCGTGGAACG AGATCCCTGA GGGATCCGTC
GAGATGTTCC CCGGACTCTT CCACATGGGC GACGGCGCGG TTGCAATTGC CGCCTTCGCA
TTCGGTGTAG TCGTCCTGAT CCTTGGCCAC ATTCTGGTCT TGTTACTTGG TATCACAAGT
GCCGGATTAC AGGGTATCAG GCTCGAGTAC GTCGAGTTCT TTGGGAAGTT TTATGATGGC
GGTGGAAAGA ACTACGAACC GTTCGGAGAC GATCGAACCC GCAGTGAGGA CTAA
|
|---|
| Protein sequence | MLRPERMSKV SVTGSKGVMP TVIETIHELN LVHLSDYDGS WEGFDNGNPI EGADDASEKL
VTVRALESTL GLSEAEASGQ GTLAENWEQR LEEVRTRINE LDDQQTEVRE ELRQVDERID
RVAPFAELGI DLDLLSGYDT VDVLVGEGSE AEVQAALEAA EDIRAYETFT SGDVVAIVAA
PTGEIDPVED AGDADNVIDD ALVGIEFTRY DVPDTEQSPS AYVSELEDRK YELESRIDEI
DDELERIERE EGSFLLQLEA ELTIEVQRAE APLQFATSDR AFIAEGWVPS DELERLKTAL
RNAVGDSLEI EELERASYDR HGRTHTDGVH QGTQDAKEGD EPSADADEDD QQQQKAVTDG
GSAVTMGDEP PTIQDNPSAA KPFEMLVQAV NRPKYNELDP TIFLFLTFPL FFGFMISDVG
YGLLYVLIGF YMYKGFDSPG ISSLGGVAIW AGAFTILFGI LFGEFFGLHE LGYMIFGEGG
APMGDKGLSP ATADFVYAWL IVAVALGVMH LNIAWILDFI ENIQHGHGLW GAITHSGSWL
LMLNGIWIWV FTPQAAGVKP EFIFTAFDGQ PFDFGFSGFD MMTVFTVPAD IAYLGGFEAT
FPFLMVIAGI VLLAIGDPVE LAEFAMPFAH VVSYARMTAV LLAKGGMAFV VNLLTFGAYE
TTDGSRPFAA PWNEIPEGSV EMFPGLFHMG DGAVAIAAFA FGVVVLILGH ILVLLLGITS
AGLQGIRLEY VEFFGKFYDG GGKNYEPFGD DRTRSED
|
|---|
| |