| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_0188 |
|---|
| Symbol | |
|---|
| ID | 8823007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | + |
|---|
| Start bp | 201449 |
|---|
| End bp | 203323 |
|---|
| Gene Length | 1875 bp |
|---|
| Protein Length | 624 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_003478342 |
|---|
| Protein GI | 289579876 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.261815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACTG AGGTTGCGCT GACCGTCGAT CTCGCTATTA TTCTCTTCAG TGCGACACTC
GCCGGATTCG TCGCCAAACA GACGGGCCAA CCGACGATCA TCGCCTACAT TCTCGCTGGG
GTCGTGATCG GACCCGCGGC ACTCGGGATC GTCGAGGTCA GCGAACTGAC TGAATTGCTC
TCCGAGCTCG GACTGGCGTT CTTGCTGTTC TTGCTCGGGA TCAAGATGCG ACTCGAGGAG
ATCCGTCACG TCCTCTCGCC GATCGTCAAG ATTTCGATCC CGCAGATGAT CGCGGTCTTT
CTCGTGGGCG CAGGGCTCGC GTTCGCGCTC AACTTTGGTC CCATCGAGTC GGTGTTGATC
GGTCTGGCGG TGATGTACAG TTCGACCGCG GTCGTCATCA AGATGCTCAC GGACAAGGAC
GAGGCGACCT CGCTCCACGG AAAGCTCGAT GTCGGTGTCT TGCTCGTGCA GGACGTCGTT
GTCGTCATTA TCCTGGCCGT CCTCGCGGCT GGACAGCCGG ACAGCCTCGC CGAGGTTGCG
ACGACGCTCG CCGTCGTGCT CGTCCTCGTT GCGCTCGTGA CGATTGCGGC GCTCGTCTCC
TCGCGAACGG TCTTACCGGT CGTCTTCCGA CGGATTGCAG ACAACGAGGA AATCTTCTTC
CTCGTCGCCA TCGCGTGGGC GTTCCTGTTC GTGTTCGTCT CCGATAACAT CAACCTGTTT
CTCGAGCCCC TGTTCGGGAT CACGGCGTAC CTTTCGATCG AGATGGGTGC GTTCATGGCC
GGCGTGGCCA TTGCACAGCT TCCGTACAGC AAGGAGTTAC AGGACCGGGT CAACCCGCTG
ACGGACCTGT TCGTCATGGT GTTCTTCGTC TCGGTCGCGA TCGACCTCGA GGCGGCACAG
CTCTTTGAGT ACGCCCCGGA GGCCATCATC GCTGCTCTGG TGTTGATGCC CGTGAAGTTC
CTCATCTTCT TCTCACTACT CGACTGGCAG GGCTTTGGCT CCGAGACGAC GTTCCTCGGC
AGCATCAACA TGATCCAGGT CAGCGAGTTC GGGATCATCG TCACCGCTGT CGCTGTCGAG
GGTGGCTTCA TCGAGCCCGA AATCCTCGGC TTCATGACGC TGCTTGCGAT CTTCACGATG
GCCGTCTCCG TATACCTCAT CGAGTTCAGC CACCAGCTAT TCGAGCGCTT CGAGCCGACG
ATCACGCGGT TTACGAGCGA GGGCGACTTC GAAGGCGGCA AACAGGAGTA TCGTGATCAC
GCGGTCGTCA TCGGCTACGA CAAGGTGACC CGAAACGCCC TCCCGTTGAT TGCGGCCCAC
TACGACGACG TCGTCGTCAT CGATCGAACG GTCGAACACA TCAAGACGCT CGAGGCGAAA
GGATACGACG CCGTCTACGG CGACTTCCGC AACGCGACGA TTCGGAAGGA TGTCGCCGTC
TCGAAGGCCG ACTTCGTCCT CTCGTCGTCG GTCGACCCGG CGGTAAACTC GGTGTTACTC
GAGTCGGTCG ACGAGAAGGC GACGGTTCTT GTCGAAGCAG AGCGCCTCGA AGACGCGCGT
CTGCTCTACG AAAGCGGTGT TCACTGTGTG CTCATGACTC CATATCTCGC GGCCGACAAA
CTTGGAGAGT ATCTGGAGAC GTACCTCGAA GAGGGTAGCG ACGACGAACT CGAGGCGGCA
CTCGAGTCGG ATTTCGAGCT GTTAGAGAGT GCTGAGCCGT TCCCGGGGGT TGGTGGTGTT
GGAACTGGAA CCGGAACTGG AACTGGAACT GGAACTGGAA CTGGTTCTGG TTCTGGTTCT
GGTTCTGGTT CTGGTACTGG TCCTGGAACT GACGATTGCA ATGACAGTGG CAGCGGAGGT
GGTCTCGATG AGTGA
|
|---|
| Protein sequence | MATEVALTVD LAIILFSATL AGFVAKQTGQ PTIIAYILAG VVIGPAALGI VEVSELTELL
SELGLAFLLF LLGIKMRLEE IRHVLSPIVK ISIPQMIAVF LVGAGLAFAL NFGPIESVLI
GLAVMYSSTA VVIKMLTDKD EATSLHGKLD VGVLLVQDVV VVIILAVLAA GQPDSLAEVA
TTLAVVLVLV ALVTIAALVS SRTVLPVVFR RIADNEEIFF LVAIAWAFLF VFVSDNINLF
LEPLFGITAY LSIEMGAFMA GVAIAQLPYS KELQDRVNPL TDLFVMVFFV SVAIDLEAAQ
LFEYAPEAII AALVLMPVKF LIFFSLLDWQ GFGSETTFLG SINMIQVSEF GIIVTAVAVE
GGFIEPEILG FMTLLAIFTM AVSVYLIEFS HQLFERFEPT ITRFTSEGDF EGGKQEYRDH
AVVIGYDKVT RNALPLIAAH YDDVVVIDRT VEHIKTLEAK GYDAVYGDFR NATIRKDVAV
SKADFVLSSS VDPAVNSVLL ESVDEKATVL VEAERLEDAR LLYESGVHCV LMTPYLAADK
LGEYLETYLE EGSDDELEAA LESDFELLES AEPFPGVGGV GTGTGTGTGT GTGTGSGSGS
GSGSGTGPGT DDCNDSGSGG GLDE
|
|---|
| |