| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4646 |
|---|
| Symbol | |
|---|
| ID | 4025796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007961 |
|---|
| Strand | + |
|---|
| Start bp | 95274 |
|---|
| End bp | 95618 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637965128 |
|---|
| Product | integral membrane protein-like |
|---|
| Protein accession | YP_572036 |
|---|
| Protein GI | 92109750 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5572] Predicted integral membrane protein |
|---|
| TIGRFAM ID | [TIGR02953] pentapeptide MXKDX repeat protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCA CAAATCCGGT GCTTGTCGCC AGCGCGTTCG CCTTTGCCCT GGGCACCTTC
GCGGCCTCGA CTGCCATGGC GCAGGATAAG CCTATGATGA CCAAGGAACA AATGATGAAG
AAGCGGGCCA TGACCAAAGA GACGGTCAAG GGCGGCAAGA TGGAAATGTG CTTTGGCGTC
GCGCTGAAGG GCCAGAACGA CTGCTACGCA GGTGCCGGCA CGACCTGCGC CGGCACGAGC
ACGGTCGACT ATCAGGGCAA TGCCTTCAAG CTCGAGCCCA AGGGGACCTG CACCACGATC
AAGACGCCCA ATGGCGTCGG CAGCCTCAAG CCCAAGTCAG CCTGA
|
|---|
| Protein sequence | MKATNPVLVA SAFAFALGTF AASTAMAQDK PMMTKEQMMK KRAMTKETVK GGKMEMCFGV
ALKGQNDCYA GAGTTCAGTS TVDYQGNAFK LEPKGTCTTI KTPNGVGSLK PKSA
|
|---|
| |