Gene Nham_4543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4543 
Symbol 
ID4025311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007961 
Strand+ 
Start bp5143 
End bp5766 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content66% 
IMG OID637965045 
Productconjugal transfer protein TraH 
Protein accessionYP_571953 
Protein GI92109667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGACG CCGCCGGCAT CCATCACTGC GCCGATCCGG TATTGAAGCC CGCGATCGTC 
GAGAAATTCA TCCGTGCGGT CGGATCGCCC GATCCGCTCA CCGTCACCAT CCGCGCCGGC 
AACCGCGTCG TTCTCGTGTC GCCGCCGAAA ACGCCGGATC AGGCGATGGC GCTCGTTCGG 
CGCTATGTCG GCCACGCCAT GGTCCGCGTC GGCGTGACGC AATATCCGGC TGGGCTCGGC 
GTCAGCGACG TCTCGGAGCT CAAGCCCGAT CTCGTCGACG CCTGCGCCAA TATCAGGATG 
GGCACCACGC TGTTCGGCAA GGTCTATCGC ATCGTCGTCA AATGGTATGG CACGCCAGCC 
GACCAGGCGT TCGGCGATGC GATCGAGGCC TGGAAGACCG GATACTTCGA CGGCAAATAT 
GTGTTCGACG AGCCCGATCC CGGCAGTCTC CCGCCACGGA AGGGCGCGCC GGGTGACAGC 
GACCAGCCTG TCAAAACGGA CGATGCGCCG AAACCTGCGA CCAGCGCCGA CAGCGGCGCG 
CAGCCAGCCA AGGAGCCGGA CGACCCGAAC AAGGCCGGCA TCCGCATCGA TCTGACCGGC 
ATCGGCGTCG GCAAGCCGAA ATAG
 
Protein sequence
MVDAAGIHHC ADPVLKPAIV EKFIRAVGSP DPLTVTIRAG NRVVLVSPPK TPDQAMALVR 
RYVGHAMVRV GVTQYPAGLG VSDVSELKPD LVDACANIRM GTTLFGKVYR IVVKWYGTPA 
DQAFGDAIEA WKTGYFDGKY VFDEPDPGSL PPRKGAPGDS DQPVKTDDAP KPATSADSGA 
QPAKEPDDPN KAGIRIDLTG IGVGKPK