| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4509 |
|---|
| Symbol | |
|---|
| ID | 4025520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007960 |
|---|
| Strand | - |
|---|
| Start bp | 157378 |
|---|
| End bp | 158088 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637965014 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_571922 |
|---|
| Protein GI | 92109635 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
|---|
| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.831717 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGC GAGCGACCGC TGATGGGTTC GATGCCGAAT TGGCCGATCT GCCAGCGGAG
CTGCGCTGGC GCGAATGGAT GGGCCGGGTC GAGGCGGCGA TCTTTGCCTC GCCGACCCCG
GTGCCGCGCG AGACGCTGGC CCGCCTCATC GGGCGGGCTT GCGTGCTCGA CGAGCTCATC
GCCGACATTC GCGACGAACT GAAGCCGCGC CCCTATGAGC TTGTCTTTGT CGCCGGCGGG
TTCCAGCACC GCTCGAAGGC GCGGTTCACC GAGGCCATCC GCGCTGTGCT TGGCGGACGC
GAGACCGGCC CGCCCGATCT GTCCAAAACC GAAAGCCTGG TGATCAGCGC GATCGCCTAT
CTGCAGCCGG TGACCCGGTC GAGCATCTCG CGGCTGCTCG GCAAGGCGAT CAGCCGCGAC
ATCATCGCCA AGCTCAAACG CCTCGATCTG ATCGGCGCCG GGCCGCGCAT GGCCGAGCCC
GGCGCGCCGT TTTCCTATGT CACCACGCCG ACATTCCTGT CGGTGTTCGG ACTAGCCAGC
CTGCGCGACC TGCCCGAGAT CGAGGCGATG CAGGAGGCCG GGCTGCTCGA TCTCGCACAA
GACATCGCGC TGGTCGATCC GCTCGACGAC GCTCTCGCCG ACGGCGACGA CTCGGATGAC
GACTCGCGCG ATCAGGTTTT CGGCGCGCCC GATCGCTTGC CCGCCGACTG A
|
|---|
| Protein sequence | MAKRATADGF DAELADLPAE LRWREWMGRV EAAIFASPTP VPRETLARLI GRACVLDELI
ADIRDELKPR PYELVFVAGG FQHRSKARFT EAIRAVLGGR ETGPPDLSKT ESLVISAIAY
LQPVTRSSIS RLLGKAISRD IIAKLKRLDL IGAGPRMAEP GAPFSYVTTP TFLSVFGLAS
LRDLPEIEAM QEAGLLDLAQ DIALVDPLDD ALADGDDSDD DSRDQVFGAP DRLPAD
|
|---|
| |