Gene Nham_4496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4496 
Symbol 
ID4025507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007960 
Strand
Start bp139382 
End bp140920 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content64% 
IMG OID637965002 
Producthypothetical protein 
Protein accessionYP_571910 
Protein GI92109623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.562444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAAG CGGTGACTGT CCGGCGCGAC GGCGATACCT TTCAGGCGCG AATCTTCTGG 
CTGCACGCCG CTCGCCTGCT CGATCCCCAA AGCCCGGTCA CGCGGGTGGG CTTCGAGACC
GGTCCGAAGA GCTTCGACGA CATCTGGGTC GAATACGATC CGGCACGTAG CGCGCTCGAT
CAGTATGGCG ACCCACTGCG GCGCGAGCAC ATGCAGTGCA AATGGCACGT GACGCCGGAC
AGCTACGGCT ATTCCCATCT CGTCGATCCT GAATTTATCA ATGCCAATGC GCGCTCGCTC
TTGCAGCGGG CGCGCGAGGC GCAACTCGCC TACGCCCCCG CAGGGATCGG CGTCCGGTTC
AAATTGGTGA CGAATTGGCG CCTCGACCGC GCAGATCCTT TGCGCGAGAT GGTCGGCAAT
CGCTCCGGCG CAATGCGCCT CGACCGGCTC TACGGCTCGC TGACGGACAA CAGCAAGGCG
GGCGCGGTGC GCAAGGCTTG GCGCGAGCAT CTGGATATCG ACGAAGAGGA GCTTCGGCTC
CTAGCGCGTA CACTCGCGTT CGGCGAGGCG ACCGACACGC TCGACGCCCT GCGTGATCAT
CTCGACATCC TGTTCGGCTT GGTCGGGCTG CGCCGCATTC CCGCGAACCA GAGCGCGTTT
CCCTATGACG ACGTCGTCTT TCAGTGGATG GCGCAGGGGC GCCTCAATTT CGATCGCGCG
GCCTTCCGAG CGATCTGCGC GCGCGAGGAC CTGCTCGGCC CAGCACAGAG CGCGCGGCGC
GTTTATGGCA TAAAATCCTT CGAGCACGCC TTCGATAGGC TTGAGGAACG CTGTCACTCG
GTCCTCGACC TTATCCCGGC CTTCGACGAA CGCTACATCC GCAGCGACAG TGATTGGGAG
ACTATCCTCT ATCCCGCGCT TCGGACCTTT CTGCTGGCGG CGGCCAAAGA TCCCCCTCGC
CTGCGGCTCG CGCTCGACGC TCATGTCACC TTGGCCTTTG CCGCCGGTTC GATCATCAAC
ATCAAGTCGG GCCGCCAGGT CGAACTGGAG CAGCGCAGCA CGAGCCGGCG CGTTTGGGCT
GCCGACGATG CGATCTCCGA TCCAAGCTGG CCGCCCCTCA TCGCGGAGTC CATAGAGCTC
CGTCCGAATC AGCCGGACCT CGCCGTCGCG CTCGGTCTGA CACATGACGT CTCGGCGGAC
GTGCGGCGGT ACTGCGAAGC AAAGCTTCCC GACGTGGGGC GGTTACTGAT CCTGAAGCCG
AGCACCGGCT CCGGCGCCCA GGCCGTTGCG TGCGGGCGGC ACGCGTTCGA GCTCGCTGAC
GGGGCGATCG ACGCAGTCCG TTCTGCAAGG GCCGAGGGGA CACGACTTAC GCATCTGTTC
ATCGCCGCAC CCAACGCCTT CACCTTCTTT CTCGGTCAGC GCCAGACGGC CCTCGGCTCC
GTCCGCCTGT ACGAGTTCGA TTTCGATGGC GGACGAGGCC GTTCCTATGC GCCCGCACTC
ACGTTGCCTT TAGCTCCTCC CACGAAAAAA GCGATTTAG
 
Protein sequence
MTQAVTVRRD GDTFQARIFW LHAARLLDPQ SPVTRVGFET GPKSFDDIWV EYDPARSALD 
QYGDPLRREH MQCKWHVTPD SYGYSHLVDP EFINANARSL LQRAREAQLA YAPAGIGVRF
KLVTNWRLDR ADPLREMVGN RSGAMRLDRL YGSLTDNSKA GAVRKAWREH LDIDEEELRL
LARTLAFGEA TDTLDALRDH LDILFGLVGL RRIPANQSAF PYDDVVFQWM AQGRLNFDRA
AFRAICARED LLGPAQSARR VYGIKSFEHA FDRLEERCHS VLDLIPAFDE RYIRSDSDWE
TILYPALRTF LLAAAKDPPR LRLALDAHVT LAFAAGSIIN IKSGRQVELE QRSTSRRVWA
ADDAISDPSW PPLIAESIEL RPNQPDLAVA LGLTHDVSAD VRRYCEAKLP DVGRLLILKP
STGSGAQAVA CGRHAFELAD GAIDAVRSAR AEGTRLTHLF IAAPNAFTFF LGQRQTALGS
VRLYEFDFDG GRGRSYAPAL TLPLAPPTKK AI