| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4485 |
|---|
| Symbol | |
|---|
| ID | 4025496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007960 |
|---|
| Strand | + |
|---|
| Start bp | 130997 |
|---|
| End bp | 132019 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637964991 |
|---|
| Product | luciferase-like |
|---|
| Protein accession | YP_571899 |
|---|
| Protein GI | 92109612 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA TCGGATTCTT GTCGTTCGGG CACTGGACGC CTTCGTCGCA ATCGCAAACG
CGATCGGCGG CCGACGCGCT GCTGCAATCC ATCGATCTGG CCGTCGCGGC TGAGGCGCTT
GGCGCAGACG GCGCCTATTT CCGCGTTCAC CACTTTGCCC GCCAGCTCGC TTCGCCTTTC
CCGCTACTGG CGGCCGTCGG CGCCAAGACC AGCCGCATCG AGATCGGCAC GGCGGTCATC
GACATGCGCT ATGAGAACCC GCACTACATG GTCGAGGATG CCGGGGCGGC CGACCTCATT
GCCGGCGGGC GGCTGCAATT GGGGATCAGC CGGGGCTCGC CCGAACAGGT GATCGATGGC
TGGCGCTACT TTGGCTACCA GCCGGCAGAA GGGCAGAGCG ACGCCGATAT GGGCCGGCGT
CACGCGGAGG TGTTCCTCGA CTTACTTCGC GGCGAAGGGT TTGCGCAGCC CAATCCGCGA
CCGATGTTTT CAAATCCGCC GGGCCTGCTG CGTGTCGAGC CCCATTCAGA TGGTCTGCGC
GGCCGCATCT GGTGGGGAGC CAGCTCTAAC GCTACCGCGA TTTGGGCGGC GAAGCTCGGG
ATGAATTTGC AGAGCTCGAC CCTCAAGAAT GACGAGACCG GAGAGCCTTT TCATATGCAG
CAGGCCGCCC AGATCCGGGC CTTCCGCGCT GCCTGGAAGG AGACCGGCCA TATCCGCGAG
CCGCGAGTCT CGGTGAGCCG CAGCATCTTT GCGCTGCTGG ATGATCGCGA TCGCGCCTAC
TTCGGTCGTG GCGGCGAGGA AAAGGACCAG GTCGGCTTCA TCGATGAGAA GACAAGAGCG
ATCTTCGGTC GAAGCTATGC CGCCGAGCCG GACGTCCTCA TCGAGCAACT CAAGACCGAC
GAGGCGATTG CCGAGGCGGA CACGCTGCTC CTGACCGCGC CGAACCAATT GGGCGTCGCC
TACAATACGC ATGTGATCGA GGCGATACTG GCCCATGTCG CGCCGGCGCT CGGCTGGCGC
TGA
|
|---|
| Protein sequence | MKKIGFLSFG HWTPSSQSQT RSAADALLQS IDLAVAAEAL GADGAYFRVH HFARQLASPF
PLLAAVGAKT SRIEIGTAVI DMRYENPHYM VEDAGAADLI AGGRLQLGIS RGSPEQVIDG
WRYFGYQPAE GQSDADMGRR HAEVFLDLLR GEGFAQPNPR PMFSNPPGLL RVEPHSDGLR
GRIWWGASSN ATAIWAAKLG MNLQSSTLKN DETGEPFHMQ QAAQIRAFRA AWKETGHIRE
PRVSVSRSIF ALLDDRDRAY FGRGGEEKDQ VGFIDEKTRA IFGRSYAAEP DVLIEQLKTD
EAIAEADTLL LTAPNQLGVA YNTHVIEAIL AHVAPALGWR
|
|---|
| |