| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4470 |
|---|
| Symbol | |
|---|
| ID | 4025481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007960 |
|---|
| Strand | + |
|---|
| Start bp | 114957 |
|---|
| End bp | 115883 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637964976 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_571884 |
|---|
| Protein GI | 92109597 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.445882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA AGGACATTGA AGAGCTGCGC GCCAAAGTGG CCTGCGCGGC CGTACTCGAA
AAGGATGGTT GGAAAATCGA CCTGAAGGAG AGCACGCGCC GCGCACTCAA ATATCGGCGC
GATGCCAACA TCATCATCGT CATCCACGAG GGGCGCGGCT GGTTCGATCC GCTGTCGCCC
GCCAAAGGGG ATGTCTTCGA CCTCGTCGAA CATCTTGGCG CCAGCGGATT CCCTGAAGCC
TGCGATCGCG TCGCCGCTCT TGTCGGCTTC GTTCCAAGCT CGCCGGTGTG GACACGCGTG
TCCAGACCCC CGGCGCTCAC GTCCGTCGCC GACCGTTGGG CGTGCCGGAC AGTCCCGAGG
CCCGGTTCGG CGACCTGGCG CTATCTCGCC GATCTGCGCT GTATCCCTGA CACCATTATC
GCGGCAGCGG TGGTTCAAGG TCGACTGCGC GAGGGTCCGC AGGGCAGCAT GTGGGCGGCG
CACGATGACC TCGCCGGCCG CGTCATCGGC TGGGAAGAGC GTGGCCCGCG GTGGCGCGGG
TTCGCCACCG ACGGGACCAA GGAGCTGTTT CGCTTTGGGC CAATCGGCGC CCAGCGAATC
TGCATCACCG AAGCCGCGAT CGATGCCCTG AGCCTCGCTG CGATCGAGGT CCTGCGCGAC
GACACACTTT ATGTCAGCAC CGGAGGCGGC TGGTCTCCGG CGACCGATGA GGCCATCCGC
GGCTTGGCCG GCCGCGTGAA CACCCGGCTT GTTGCCGCGA CCGACAACAA TCGGCAGGGC
GACGTTTACG CCGATCGGAT TCGCGCCATC GCGGCGGAAG CGACCGCGCT TTACGCACGA
TCGCGTCCCC GCGCCGGTGA CTGGAATGAG GATCTGAAGG TTCTGGTCAT GCGACTGGAG
ATAGAGCCTG TCGCAGCCAG CGGGTAA
|
|---|
| Protein sequence | MEKKDIEELR AKVACAAVLE KDGWKIDLKE STRRALKYRR DANIIIVIHE GRGWFDPLSP
AKGDVFDLVE HLGASGFPEA CDRVAALVGF VPSSPVWTRV SRPPALTSVA DRWACRTVPR
PGSATWRYLA DLRCIPDTII AAAVVQGRLR EGPQGSMWAA HDDLAGRVIG WEERGPRWRG
FATDGTKELF RFGPIGAQRI CITEAAIDAL SLAAIEVLRD DTLYVSTGGG WSPATDEAIR
GLAGRVNTRL VAATDNNRQG DVYADRIRAI AAEATALYAR SRPRAGDWNE DLKVLVMRLE
IEPVAASG
|
|---|
| |