Gene Nham_4434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4434 
Symbol 
ID4025445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007960 
Strand
Start bp79702 
End bp80883 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content62% 
IMG OID637964942 
Productmajor facilitator transporter 
Protein accessionYP_571850 
Protein GI92109563 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGCC GCCAGCTTCC GGTCATCTTC GCGCTTGGGA CAACGCAAAC CCTCGCGTGG 
GCCTCCAGCT ATTATCTTCC GGCGATTTTG GCTGATCCAA TCGCGCGAGA CCTCGGCATC
TCGAGCAACT GGTTCTTTGC CGCGTTTTCC GCCGCCTTGG TCATCTCCGG ATTGCTCGGG
CCGCGTGTCG GACGTCAGAT CGATCTGATC GGGGGACGGC CAGTCCTTTC CGGATCGAAT
TTGATCTTCG CTGCTGGTCT GGCGTTGCTT GGGGCATCGA CGTCGGGTTG GATGCTCGGA
GCGGCTTGGT TTCTGCTCGG CATCGGAATG GGAACGGGGC TTTACGATGC GGCATTCGGT
GCGCTGGGGC GCATCTATGG CAACGATGCC CGACGCGCGA TCACGGGAAT TACGCTGATC
GCGGGATTTG CCAGTACGGT TGGCTGGCCG CTCAGTTCGT TCGGGCTTGA GGCGATCGGA
TGGCGAGCCA CGTGTTACGC CTGGGCCGTC GCGCACCTTC TGGTCGGGTT TCCTCTCAAC
CTCCTCTTTC TGCCGAGGGT TACGACGGCA AAGCGTAACG AGGCATCGAC CGTCAAACCG
CACATGCCGA TCGACCGCAC CATGATCCTG CTGTCCTTGG CGTTCGCGGC AGCATGGACG
GTCACCTCCG CGATGGCGGC ACACCTGCCG CGTATCGTCG AGGCGTTCGG TGCAACGCCA
GCGCAGGCTG TTTTTGCGGG GATGATGATC GGCCCCGCCC AGGTGGCGGC GCGTGTCCTG
GAAGCGGGCA CGCTGGGCAG ATTCCATCCG TTGTTCTCGA CCCGGCTTGC CTGCATCACA
CATCCCATCG GCGCCTGCAT AATCGGAATC TTCGGAGGCG GTGCCGCGGC GGCATTCGCC
TTGCTTCACG GGGCAGGCAA CGGTTTGCTC ACGATTGCTC GAGGTACACT GCCGTTGGAA
ATCTTCGGTC CCGAAAACTA CGGATATCGC CTCGGGCTGC TCGGTGCGCC GTCCCGCGTT
TGTCAGGCCC TGGCTCCTCT GGGCTTTAGT CTGCTGATTG ATCCACTCGG GGGAGCGGTT
CTGATTGTAT CGTCGTTGCT GAGTCTGGTC GCGTTCGGTG CGCTGTTATT GCTGCCAAGG
CATGCAACCA AGGACACCGT GGCCGAAGAG GCGAAAAGCT GA
 
Protein sequence
MSGRQLPVIF ALGTTQTLAW ASSYYLPAIL ADPIARDLGI SSNWFFAAFS AALVISGLLG 
PRVGRQIDLI GGRPVLSGSN LIFAAGLALL GASTSGWMLG AAWFLLGIGM GTGLYDAAFG
ALGRIYGNDA RRAITGITLI AGFASTVGWP LSSFGLEAIG WRATCYAWAV AHLLVGFPLN
LLFLPRVTTA KRNEASTVKP HMPIDRTMIL LSLAFAAAWT VTSAMAAHLP RIVEAFGATP
AQAVFAGMMI GPAQVAARVL EAGTLGRFHP LFSTRLACIT HPIGACIIGI FGGGAAAAFA
LLHGAGNGLL TIARGTLPLE IFGPENYGYR LGLLGAPSRV CQALAPLGFS LLIDPLGGAV
LIVSSLLSLV AFGALLLLPR HATKDTVAEE AKS