Gene Nham_4407 details

Gene Information

• Locus tag: Nham_4407
• ID: 4025267
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007960
• Strand: -
• Start bp: 56966
• End bp: 57607
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637964915
• Product: hypothetical protein
• Protein accession: YP_571823
• Protein GI: 92109536
• COG category: [S] Function unknown
• COG ID: [COG4944] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAACCA ATGAATTGAT TTCCATGCTC AGTTCGCAGG TCGACCCGGT CGATACGCGA 
GAAGTTGTCC GAAACGTCCG GATTGCAATC TTGGTTGGCG CCGCGGCATC CCTGCTGGCG 
GTGGTTTTTG TCCTCGGCGT TCGCACCGAC CTCAACGAGA TGCACGCCCA AGTCTTCCTG 
GTCGCAAAAC TCGCCTTCAG CCTGTCGGTC GTGATTTTGG CCTCGCATTA CCTGGTCAAG 
TACATCCGTC CCGGCGGCGA ATTTCGGGTC CGGTTCGCCC TCACCGTCCT GCCGTTTCTC 
GCGGTCATGA TCCTCGCGGC CATCAGCCTG GCCACGGCAC CGCGGTCGCA CTGGGAAACC 
ATGGTGTTCG GCAGCTATTG GCTTGAGTGT CTGATCGCCA TCCCGACGGT CGCGGTCGTG 
CCGTTCGCCG CCATCATGTC GGCGGTTCGC CTCGCCGCGC CTACCGACCT GGTCCGCACC 
GGCGCGCTTG CAGGACTCGT CGCGGGCGGC GTCAGCGCAA CCGCCTACGC TCTGCATTGC 
ATGGATGACC TGCTTCCCTT CATTGCGCTC TGGTATGGTG GAACAATCGT TTTATGTACG 
GTCGCCGGCG CCGTACTCGG GCCCAAATTG CTGCGTTGGT AG 

 

Protein sequence

MKTNELISML SSQVDPVDTR EVVRNVRIAI LVGAAASLLA VVFVLGVRTD LNEMHAQVFL 
VAKLAFSLSV VILASHYLVK YIRPGGEFRV RFALTVLPFL AVMILAAISL ATAPRSHWET 
MVFGSYWLEC LIAIPTVAVV PFAAIMSAVR LAAPTDLVRT GALAGLVAGG VSATAYALHC 
MDDLLPFIAL WYGGTIVLCT VAGAVLGPKL LRW