| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4194 |
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| Symbol | |
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| ID | 4025634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007959 |
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| Strand | + |
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| Start bp | 153030 |
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| End bp | 154676 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964741 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_571649 |
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| Protein GI | 92109361 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAGATG ATCCCTTCGC CGCTCCGCGC GCCGCCCATG GCCGCGCCCC CGATGTGTTC
CGTCCCGGCG GATGGATTCC GATGCGACAG CACCGGCAAG ACGAGCCCGT CGACTTTGTC
ATCGTCGGCA CCGGCGCCGG CGGCGGCACG CTCGCTTGCC GCCTTGCCGA GCACGGCTTC
TCCGTCGTTG CCATGGATGC GGGACCGTAT TTCCGGCCAC TCGAGGATTT CGCATCGGAC
GAGTCGGAGC AGACCAAATT GTATTGGACC GATGACCGCA TCGTCGACGG AGCCAATCCG
CTCCAGATGG GCGGCAACAA CAGCGGCAAA GCCGTCGGCG GATCCACCGT GCACTTCGCG
ATGGTCTCGC TCCGGTTCCG TCCGGCATGG TTCAAATCGC GCAGCCTGCT CGGCTATGGC
GCTGACTGGC CACTCGATTG GCGCGAGATG TGGCACTATT ACAGCGAGGT CGAGGACGCA
TTGAAGATCG CCGGCCCGGT CAGCTATCCC TGGGGGCCGC GCCGGCCACG ATATCCCTAC
CGGGCCCACG AGCTCAATGC CGCCGCACGC GCGCTCGCCG ACGGTTGCGA AGCATTGGGA
ATCAAATGGA CGGAAACGCC TATCGCCACG CTTTCGGCAC CACGCGGATT GGCGCATCCG
TGCGTGTATC GCGGATTTTG CACGTCGGGT TGCGCGACCA ACGCCAAGCA AAGCGCGCTG
GTGACCTGGA TTCCGCGCGC CATCGCAGCC GGCGCCGAAA TCCGCGATCT CGCAATGGTC
GGCAGGATCG AAACGGACAA TTCAGCCGTA GCGACCGGCG TGCACTACTA TCGCGACGGC
CAGTGGCGTT TTCAGCGCGC GCGCAATGTC GTCGTCGCAG GCTATGCGAT CGAAACGCCG
CGACTGCTGC TGAATTCCGC GACCGGTCGT TTCCCCGACG GACTCGCCAA CGGCTCCGGT
CTGGTCGGCA AGAATCTGAT GGTGCAGTCG AACCAGGCCG TCTGGGGCAC GATGGAGAGG
GAAGTGCGCT CCTACAAGGG GCCGCCGTCC CTCGCCATCA CCGAACACTG GAACTACGAG
GATAAGGGCA AGGACTTCTT CGGCGGCTAT TGCTACATGA GCCAGGGCCC GCTGCCGCAG
TTGTGGGCCA ACACCCTCAT GAGCGCCCGC GGCCTTTGGG GAGCGCGGCT GATCGAAGAA
ATGGAGAAGT ACAATCACGT CGTCGGTCTC AAGATCGTCG GCGAAATGTT GCCGCAGGAG
ACCAATCGCG TCACGCTTGC CGACGAGACC GATCAATACG GACTGCGGAT CCCGCGCATC
ACCTACGCGT GGTGCGACAA CGACCGGCGC CTGATCGATC ACTCCCTCGC GTTCATGACC
CAGGCGCTCG AGGCCGTCGA CGCAACCGAC CTCTGGCGTC AGAATGACGA CACCTGTCAT
TTGAACGGCG CGGCGAGGAT GGGAGATGAT CCGTTCACCA GCGTCGTCAA TGCCGATTGT
CGAAGCTGGG ACGTTCGCAA CCTCTGGATC TGCGACGGGT CGGTCTTTCC CACCGTCGGC
GGCGTCAATC CCTCCCTGAC AATCCAGGCG ATCGCCTGTC GGACGGCCGA CCGGATCAAG
ACCATGGCCG GCCGAGGCGA ACTTTAG
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| Protein sequence | MSDDPFAAPR AAHGRAPDVF RPGGWIPMRQ HRQDEPVDFV IVGTGAGGGT LACRLAEHGF
SVVAMDAGPY FRPLEDFASD ESEQTKLYWT DDRIVDGANP LQMGGNNSGK AVGGSTVHFA
MVSLRFRPAW FKSRSLLGYG ADWPLDWREM WHYYSEVEDA LKIAGPVSYP WGPRRPRYPY
RAHELNAAAR ALADGCEALG IKWTETPIAT LSAPRGLAHP CVYRGFCTSG CATNAKQSAL
VTWIPRAIAA GAEIRDLAMV GRIETDNSAV ATGVHYYRDG QWRFQRARNV VVAGYAIETP
RLLLNSATGR FPDGLANGSG LVGKNLMVQS NQAVWGTMER EVRSYKGPPS LAITEHWNYE
DKGKDFFGGY CYMSQGPLPQ LWANTLMSAR GLWGARLIEE MEKYNHVVGL KIVGEMLPQE
TNRVTLADET DQYGLRIPRI TYAWCDNDRR LIDHSLAFMT QALEAVDATD LWRQNDDTCH
LNGAARMGDD PFTSVVNADC RSWDVRNLWI CDGSVFPTVG GVNPSLTIQA IACRTADRIK
TMAGRGEL
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