Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4168 |
Symbol | |
ID | 4025554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007959 |
Strand | + |
Start bp | 125468 |
End bp | 127306 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637964717 |
Product | hypothetical protein |
Protein accession | YP_571625 |
Protein GI | 92109337 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0632962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGACGA GGCCCCGATT GAGAACTACT GGCAGGACGG GCAGCTCAAC CTCGGCACCG ACCGCTCAAA CGGGCGCACT ATATGCGCGT GACCAGCCTC ATCATGAAGG ACCAGAGCAT CAAGGTATCG TTGGTGCTCG ACGATGGCCA GCCGGTGGAG GCCTTCACCA TCGAGGGCGA TGGCGCCTAT GTCGACCAGG GCATCAACAC CACCATCGGC AGCGAGACTA TCGGCTCCCA TCTGGTCGGC GGCGGGGGCG AGGCGACTGC CCACCCCTTC GACGTGAGCT TCGAGATACA CACGGACAAG TTTCAGCACA TCAGCGCGCG CTTTCTGAAA GACGCGATGA ACAACCAGGA CGCGAAGGCC CAGGGGGGAC GAAGGACAAT CCGTGCATCC TCTTTGACGT GGTGACCGAG CTCCAGACCA ACGACCTGCT AATCGCCGAC TTCGGGCAGC TCTACAACCA AACGCGCACA AAGGACGAGG CCACGCTCAA GCGGGTTTCG AACTTCGTGA CGAACAACCG CATCCGCGTT GAGGCGCATA CGGCCCTTAC GCCGATGCGC GGGCGCCTCT ACCAGCAGCA TCGCCCTGAC TTCATCCTCA GGGACGACCT CGAAAACGCC GTCACGGCGG ACAGTCCAGC CATCACCGAG AAGATCATCC GGCTTCTCGA CGAGGCAAAA GGCGGCATGG CCGGGCGCGG GGTGTCGCTT ACTCTCGGAA ATTTCATACT CGAAGCGGGA GTCATGGGCT ACGTGCGCAA AGCCGTGAAT GGATCGGGCG GACGGGCGCG CTTCATCCCA ATCGTGAACC GGCAGGGAGA GCCGGCCTGG CCCGACAAAT ACGTCAAAAC CGACGCTGAC GCTGCCGCCG TCAACGCCGA TATCGCGGAC CCGAGCAAAC GCAAGATATC GTTTGAAGGA AAGCGGCGCG AGCTGAACGC CGGAGGGCGG CGCGTCTACG AGGTCGAAAT GCTTCTCGAT CCAGTCGCGG CCGGTTCCCC ATTTTTCGAC CGCCCAACGA TCGAGCGGCT TATCGCGCAG TGCGTTAAGC CGACGGGCGA GAAAGCGGGC CTTTTCCTTT GGCAGGAATA CAACCCCTCG CATCGCTACG CGATAGGGAC TGACACCGGC AAAGGCAACG GCAACGACCA TAGCACGTCC GTCCTCATAG ACTTCTCGAC GATCCCGGCC CGGAAGGTCG GGTCCTACGC GAACAATCTC ATTCCCGCGG ACCAGTTCGC CTACGAGCTT AAACGGCAGG CCGACCTCTT CGGTTCCTGC CTCATCGCGC CTGAGAAGAA CAGCGAGAGC GGCGGCTCGT GCCTCACGAC GCTCAAGATG ATCTATGACG CGAGCCTGAT CTACCGGCAG GTGCCGCTGG ACCGCTTAAC CGCCAACACG TGCAGCAATC AAGTATTTAC CGCAGCTACG GCGGCGGGCG TGTTCATATG CTCAACCGTC TCGAACGCGA TGCTCACGAA TTCGACCATA TCGGGTGTTG CCCTGGGCGG CACGCTCAAT GCACTCACCG CCACCGACAG CACGCTCACC TTCTCGGGCA GCTACAACGG CTCGCCCGCG CGCCATCGGC ATCAATCTTG CCAACACGAA TACGTGGACC GCCTTACAGT GCTGGCTTTC ACCGCTGGCC AGGCGCTCGC GTATCTCCGC CAGCTGCTTG GTATTGAGCT TGGGCCGTCT GCCCATCTTC ACGCCGCGTG CCCTCGCCTG CCGGCGGCCC TCGCTGGTGC GTTTGTGAAT GCGCTCGCGC TCATCCTCGG CCATGGCGGA AAACAGCGCC ATGAACCCTT TGCCCGAGCA CGCGGATAG
|
Protein sequence | MTTRPRLRTT GRTGSSTSAP TAQTGALYAR DQPHHEGPEH QGIVGARRWP AGGGLHHRGR WRLCRPGHQH HHRQRDYRLP SGRRRGRGDC PPLRRELRDT HGQVSAHQRA LSERRDEQPG REGPGGTKDN PCILFDVVTE LQTNDLLIAD FGQLYNQTRT KDEATLKRVS NFVTNNRIRV EAHTALTPMR GRLYQQHRPD FILRDDLENA VTADSPAITE KIIRLLDEAK GGMAGRGVSL TLGNFILEAG VMGYVRKAVN GSGGRARFIP IVNRQGEPAW PDKYVKTDAD AAAVNADIAD PSKRKISFEG KRRELNAGGR RVYEVEMLLD PVAAGSPFFD RPTIERLIAQ CVKPTGEKAG LFLWQEYNPS HRYAIGTDTG KGNGNDHSTS VLIDFSTIPA RKVGSYANNL IPADQFAYEL KRQADLFGSC LIAPEKNSES GGSCLTTLKM IYDASLIYRQ VPLDRLTANT CSNQVFTAAT AAGVFICSTV SNAMLTNSTI SGVALGGTLN ALTATDSTLT FSGSYNGSPA RHRHQSCQHE YVDRLTVLAF TAGQALAYLR QLLGIELGPS AHLHAACPRL PAALAGAFVN ALALILGHGG KQRHEPFARA RG
|
| |