| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3915 |
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| Symbol | |
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| ID | 4032419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4294087 |
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| End bp | 4294803 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637972290 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_579064 |
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| Protein GI | 92119335 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGTCA GCGTGCAGGT TGACGCTTGC CCGGTTATGG TGGAGGACCT AGAATTGCCG
AAAGCCGCCA TCTTCGACCT AGACGGCACG CTGCTGGACT CGGTGGATCT CCACGCGCTC
GCATGGCAGC AAGCTCTGCG GAAGTTCGGC CACGATGTGA GCTTCGAACA GGTTCGAAGC
CAGATCGGCA AGGGGGGTGA CAAGCTCATT CCCGTCTTTC TGTCCGCCGA CGAACAGCGG
GACCACGGCA AAGAGATGGA AGAATGGCGC GGCAATCGCT TCAAAACGGA ATACCTGCCG
CTTGTGCGTC CCTTCTCGGC GGTCCCAGAT TTACTGCGAC GCGTGCGCGA CGCGGGACTT
CAGGTCGCCG TCGCCTCCTC GGCCAAGAAG GACGAACTCG ACAAGTACCT CGACATCGCG
CGTATCACCG ACCTGGTGGA CGTGACGACT TCTTCAGACG ACGCCGAGGA ATCGAAACCG
GCGCCGGACA TCTTCGAGAT CGTTCTCAGG AAGCTCAAGA TCGAAGGCGC CGACGCCGTC
GCGATCGGTG ACACGCCATA CGATGCCGAA GCAGCGGTGA AGGCAAAGAT CGCGACCATC
GGCGTGCTTT GCGGCGGGTT CACCGAGAGC TCGCTACGGC AAGGCGGATG CATCGAGATA
TACCCCGGCC CGGCCACACT GTTCGCTCGC TTCGCCGACT CTCCGCTTGC GAGGTAG
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| Protein sequence | MPVSVQVDAC PVMVEDLELP KAAIFDLDGT LLDSVDLHAL AWQQALRKFG HDVSFEQVRS
QIGKGGDKLI PVFLSADEQR DHGKEMEEWR GNRFKTEYLP LVRPFSAVPD LLRRVRDAGL
QVAVASSAKK DELDKYLDIA RITDLVDVTT SSDDAEESKP APDIFEIVLR KLKIEGADAV
AIGDTPYDAE AAVKAKIATI GVLCGGFTES SLRQGGCIEI YPGPATLFAR FADSPLAR
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