Gene Nham_3879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3879 
Symbol 
ID4029490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp4257016 
End bp4257723 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content61% 
IMG OID637972263 
Producthypothetical protein 
Protein accessionYP_579037 
Protein GI92119308 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.726285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATT TTCTGGACAA TCTGAAGGAA GCGGTTCGCG AAAATCCGCT TTCTGCCGCG 
CTGATCGGCG GCGGCGCGTT ATGGCTCTTG ATTGGTGACG AGAGGTTGAA GAACGCGGCA 
GCTTCGACGA GCGCGGCACC CGCACCGCTC GCCGATATTG GTGCCAATCT GCGGTCGAGC 
GAGACCAAAA TCACGAACAG TCCGCCGACC GCTCCGGAAA TCGACCACGA ATTGCAGCCT 
GGCGGCCATA GGTTGCGCGA GGCCACGAGC GCGGCTTCAG AGGCTACATC CGGCGCCGCA 
AACGCGATCA AAGATCGGTT GGGAGAAGGG ATCACTTACG CGCGAGAGAG TTTCAGCAAA 
GCGACCGAGG CGCTTCCCCC GAAGGAGACC ATGGCGAAAG TCCAATCCTC CCTTTCCGAT 
CTGCTCGAGA GACAGCCGCT GGTGCTCGGC GTCATAGGTT TGGCGGTCGG GGTTGCCATC 
GCAAGTGCGT TCACGGCGTC GGATCTCGAA AATGAATGGG TCGGTGAAGT CAGTGACCGC 
GTCAAAGAGG ACCTGAAGGC GCGTGCCGGA GCCGTCTCGC ACAGCGCACG AGAGGCTTCC 
GACACGCTAA AGGCCGAACT TAGTGACATC GGATCTGAAG CCGTGGATCG GCTGCACGAG 
ACCGGCCGCA ACGCGGTGAA TGCAGCCCGT GGAAAGGCGA GCGCGTAA
 
Protein sequence
MSNFLDNLKE AVRENPLSAA LIGGGALWLL IGDERLKNAA ASTSAAPAPL ADIGANLRSS 
ETKITNSPPT APEIDHELQP GGHRLREATS AASEATSGAA NAIKDRLGEG ITYARESFSK 
ATEALPPKET MAKVQSSLSD LLERQPLVLG VIGLAVGVAI ASAFTASDLE NEWVGEVSDR 
VKEDLKARAG AVSHSAREAS DTLKAELSDI GSEAVDRLHE TGRNAVNAAR GKASA