Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3728 |
Symbol | |
ID | 4030062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 4107929 |
End bp | 4108828 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637972137 |
Product | periplasmic binding protein |
Protein accession | YP_578912 |
Protein GI | 92119183 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTGT TGGCGCGGTT GCAGCGCCTC AGTGAGGCGA TCCGGGCCGG CATCGCCGGA CGCAGATGCG GCGGTCTTGC CGCGGCCGCT CTCGCATTGA CCGCCGGGGT CGTCACGCAG ACGCAGGCCG CCGATCCGCA GCGCGTCGCC TCGATCAACC TGTGCACCGA TCAGCTCCTG ATGACGCTTG CCGATCCCGC CCAGATCCTC GGCCTCAGCC CTTATTCGCG GGATGCAGCG CGCTCCTGGG CCGCGACGGA GGCGAAGAAA TATCGGCGGC TTTCCGGGGA GGCGGAGGAT GTGCTGATGC TCAGGCCGGA TGTTGTCGTC GCCAGCCGCT ACATGAAGCG AACGACGCGC GAGTTGCTGA AACAGCAGGG GATGCGCGTG GCCGAGTTCG ATATCGCAAA ATCGATCGAC GACGTGAAGG AGCAGATTCG CCGGATGGGC GATCTTGTCG GGCACCCGGA TCGCGCGGAA GCCCAGATCG CGCGGCTCGA TGCGGCGATT GCCCGCGCGA GGGAGGCAGT GGGGCGCAAG CCCTATCGGG TGCTGGCGCT GTCGCGACGC GGCTGGGTTT CGGGCGATGA CAGCGTCACC AGCGCGTTGC TCTCGATCAC CGGGTTGTCG AATGCCGCGT CCGGCCTTGA CATCAGCTCC GGCGGGTTTG CCAAGCTGGA AACCATTGTT GCCGATCGGC CGGACTTTAT CCTGATATCC GACGACAGCG ACGTCGCGGA TGACGAAGGA AGCGCGCTGC TGCTGCATCC GGCGCTGGAA AAACTGTATC CGTCGTCGCG GCGCATCGTG ATTCCCGAAG ACCTCACGGT GTGCGGCGGG CCGATGCTCG CCGATGCGCT GGACCGGCTG GTCGCGGAGC TGAAGCGCGT CGGGGGCTAG
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Protein sequence | MSLLARLQRL SEAIRAGIAG RRCGGLAAAA LALTAGVVTQ TQAADPQRVA SINLCTDQLL MTLADPAQIL GLSPYSRDAA RSWAATEAKK YRRLSGEAED VLMLRPDVVV ASRYMKRTTR ELLKQQGMRV AEFDIAKSID DVKEQIRRMG DLVGHPDRAE AQIARLDAAI ARAREAVGRK PYRVLALSRR GWVSGDDSVT SALLSITGLS NAASGLDISS GGFAKLETIV ADRPDFILIS DDSDVADDEG SALLLHPALE KLYPSSRRIV IPEDLTVCGG PMLADALDRL VAELKRVGG
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