| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3707 |
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| Symbol | |
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| ID | 4030577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4079521 |
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| End bp | 4083354 |
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| Gene Length | 3834 bp |
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| Protein Length | 1277 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637972118 |
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| Product | ATPase |
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| Protein accession | YP_578893 |
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| Protein GI | 92119164 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.405586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCCG GAGCAAGACG CTTGCCAACC ATGCACGTTT CTGTCCGCGT GCCATGGCAC
GACGGTCGAT GGGCCGGAAA AATTTGTGCC AATCCGCGTG GAAACACCTC CTGCCTTGTC
CTCCCGAGAA TTGCAGAAAT CCGAGACGAT GACTTCGAGT CAAGCATTGC CGGTGAAGCC
TGGGATGCGG AGGGCGTACA GCTACCGGCT TGTGCAGCTG AGCGCGGCGC GTTTATGGCT
CCCTTTGGCT ATAGCCACCG CACCCGACAT CCTTACAGCA AGCGCACTGA TGGCGACGGG
AAGATTTATG CTCATTTCCG CGAGACTACC TTTCAACATG CTCCCTATTC CGCTGCGGCC
GTCCCGTTCG GATGGATGAT GAAAGACGAT GACGGCGTTC CGGCCAAAGC GAAGGCGTAT
CAGTTGGGTT TCATGCCGGA GCTTGAACCC AAGCTGTCAT TCAAGACGAT TTGGGTTCAG
GAACGCCGGA ACCAGCTTGC GATGCTCGAC ACATTCTTCG GCGCTATCAC CCCCGAGGAG
TCTCTTGTTT TCTTCTACGC CAAGCGCACT CCGCTGACGG ATGACGGGCG GCGAGTCATC
GTCGGCATAG GTCGAGTTCT GAAGGTCGAC CCTTCCATCG AATACATCTA CGAGAAGGGG
GTGTCGGCGG ATGCCATGCG CTGCGTCCTG TGGGAGCGCA ATCTGCATCA CTCGATCCGC
CCAGAGATCA AGGACGGCTT TCTCCTTCCC TACCACGACC TGATCGACCT AGCCGCAAAA
GACCCGAGCA TTGATTTGTC GAGTCTTGTG CTCCACGCAC CCGAGGAACA TTGGGATGCA
TTCTCAATGG GCACTGAGCA TGTGACGCAT GACCAGGCGA TCACGGTTCT GCTCGCCTGC
GCGTCGCTAT TGGAGCGCCT CGAAAAGGTG ATACCTGGCA ACTGGTCCGC CGCTTGGGGC
TGGGTCGACA CTCAGCTCAA CCGAATCTGG CGCCTTCGAG GTGCCTTTCC CGGCCTTGGC
TCAGCGCTAA CAGCGTTCGG ATTGACTCAC GGCACCCTGG TCGCTCACGC CATTGGTCAA
CAGCTGCACG CGGACGGGTC TCAGGATGTG CGCGATCCTT GGCCGCTCGT CGAAAAGGTG
CTTCACGAGC CGACACTGCT CGCTCCCGAT TTGGCAGCGA CCGTTGGTCC GACGGCGGCA
AAACTCTGGG GCAGCCTGAA GCCCGAACGG CGGGCGCTGC TGAAGCTGCT TGCCAGATTC
GAGATCACTG CCGATCAGGC GACCCGATGG TTTGTAACCG AGGAACGCAA GCGGGCAGAC
ATCACGGCTT CTGACACGGA AATTCTGGCG AACCCGTATC TTTGCTTCGA AGACGACCGC
GGACGCATAG ATCCGATTTC GGCAGCAGTG ATCGATCGTG GACTGTTCCC CGACGCCACG
ATTGCGGCAG CGGCGCCCGT ACCTGATTCC TCCCGCTGTG CGGAGGCGAT TGATCCTCGT
CGCGGCCGCG CGTTGATGAT CACCACGCTC GATCGAGCAG CCGGTGAAGG GCATACCTTG
CTTCCCCAAT CTTGGCTCGT GCAACGCGTC CGCGACCTCG ACATCTCGCC CCAATGCGCA
ATCGGCGCCG ATTGGATCGA GGCATTTGGC ACGTTCTTGA AGGCAAGGAT CGCCGTCGCC
CGTATAGCGG ATGGCACACC CGCATGGCAG CTCCAGGAGT ATGCAGAGTC ACGCGACATC
ATCTCGGCTC GTGTAAAACG GCGCCTCGCG GGCAAACGCC ATGCTGGTGA GCACGATTGG
CGAGTCCTCA TCGACCAGCA GCTTCCGCCG TTTGCCGACG CGAGCGACCC CGAGACGGAA
GAGCTTGCGC GCATCGAAAA AGCCAGAGCG CTGGAGGAGA TTTATCGGTC CCGGTTTTCG
GTTCTGATCG GGCCTGCTGG CACGGGCAAG ACGAGCCTGT TGACGGCCCT CCTGTCGTTG
CTGTCAGTCG CCGCCGGTGG TGTCCTCCTG CTCGCGCCGA CCGGCAAAGC GCGGGTTCAG
ATGCAAAAGC GGGCCAAGAA CGCGCAGGCC TACACACTCG CGCAATTCTT GTTGGCACTC
GGACGCTATG ACCCGCTGAC CGGGGCCTAT CGCGTTACCG ATGGCGCGAA CCGCGAGCGC
GGCTTCAAGA CTGTAGTCAT CGACGAGTGC TCGATGCTGA CCGAGGACCA ATTGGCAGCC
ATCCTTGATG CTATCGAGAC AACGGCCGTC GAGCGATTGA TATTGGTGGG CGATCCGAGG
CAGCTCCCGC CGATCGGCGC GGGTCGCCCC TTTGTCGACA TCGTCCGCTA TTTGAACGAC
GACCATGCTA TCGCAAATAA CGAGGCGCCG GCCGGGTATG CGGAACTTAA GATCGTACGC
CGGCAGACCG AGCAATCAGT CGCGGCGGGA CAGCCGTCAG CGGCTCGTGA CGACATCATC
TTGTCGAGGT GGTTCGGGGG AGAGGCTCCC GATCCCGGTG CTGATGAAGC CTGGGATCGT
CTAGCCAGCG GCAAGTCGAT CGGCATTCGA GCTGTTCGCT GGGAAGGCGA CACCGACCTC
CAGACGAAGC TTCTTGCCGA GATCAAGGCA GCGACGCGGG CCATTTCGAA CAAGCAAGGC
TTCGACGACG AGCGGGACGA CGCCACCTTC GAAATTAGCG TCGGCGGTCG TCCGTACAAT
AAGGCGGTCT ACTTCAACCT GTCGCGTTCG GAAAAAGACG CCAAGGGCGT CGAAAGCCGT
CGTGGTGGAG GCGCCGACGC TGAAGCATGG CAGATACTGT CACCGGTACG CGCTGGCGAG
ACCGGCGTAG ACGGTTTGAA TCGATGGCTT CAAAAGTCCT TCCGACGGCA AGCACGTGCT
TGGGCCGAAC CCGAAAAATA TTGGGAGCGA AAGACCTGCA AGCCGTTGGG CGCACAAGGG
GTCCTGTACG GCGACAAAGT GATCAATGTC GCCAATGCGA GGCGGTACGA CGTCTATCCG
AAAATGGAGA AGGGTTATCT CGCCAACGGC GAGATCGGAA TTGTTGTGGG TCAGTACAAA
GGGAGCAGTT GGAAGCCAAA GGGGCTCCCC TGGAAGATCG AGGTCGAATT CTCTTCGCAG
CTCGGTTTCA AGTTTGGCTT TGGAGGAAGT GATTTCGGCG ATGAAGGCGA AGCGCCTTTG
GAGCTCGCTT ATGCGTTGAC CATCCACAAA GCCCAAGGCA GCGAATTCGG CATGACGTTC
ATCGTGATCC CGAACCCCTG CCGCCTGCTT TCGCGCGAAC TGCTCTACAC CGCATTGACT
CGTCAACGCG AAGAAGTGGT CCTCCTTCAC CAGGGCGACC TTCGCGCCCT CTTAAAGCTG
TCTTTATTCG AACATTCCGA AACCGCCCGT CGCCTGACAA ATCTGTTTTT CGATCCCAAG
CCTGTCGAGC ATGTCGGCGC ATTCCTCGAA GAAGGTCTCA TTCACCGCAC CACACGCGGC
GAGCTCGTCC GTTCAAAATC AGAGGTGATC ATTGCCAATC TGCTTCACGC CCTTGGCATA
ACCTACGCCT ACGAACAACC CTTCACAGGG CAGGACGGCA GCGTTCGATA TCCTGACTTC
ACGATTGAAG ACGCAGAGAC TGGTCGGCGT GTCTTTCTGG AGCACCTTGG GATGCTGACT
GAACCAGCAT ATCGACGCCG CTGGCTAGCG AAGTTGGATT GGTATCGGTC TCAAGGGGTG
TTGTCGGAAG ACGAGGGTGA AGGAGATGCG GGAATCCTCG TGACGACTAC TGAAGAGAAG
GGAATCGACT CTGCCGGCAT TGAGCAGAAA CTGCGCGTGC TGTTAGGGCT ATAG
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| Protein sequence | MIAGARRLPT MHVSVRVPWH DGRWAGKICA NPRGNTSCLV LPRIAEIRDD DFESSIAGEA
WDAEGVQLPA CAAERGAFMA PFGYSHRTRH PYSKRTDGDG KIYAHFRETT FQHAPYSAAA
VPFGWMMKDD DGVPAKAKAY QLGFMPELEP KLSFKTIWVQ ERRNQLAMLD TFFGAITPEE
SLVFFYAKRT PLTDDGRRVI VGIGRVLKVD PSIEYIYEKG VSADAMRCVL WERNLHHSIR
PEIKDGFLLP YHDLIDLAAK DPSIDLSSLV LHAPEEHWDA FSMGTEHVTH DQAITVLLAC
ASLLERLEKV IPGNWSAAWG WVDTQLNRIW RLRGAFPGLG SALTAFGLTH GTLVAHAIGQ
QLHADGSQDV RDPWPLVEKV LHEPTLLAPD LAATVGPTAA KLWGSLKPER RALLKLLARF
EITADQATRW FVTEERKRAD ITASDTEILA NPYLCFEDDR GRIDPISAAV IDRGLFPDAT
IAAAAPVPDS SRCAEAIDPR RGRALMITTL DRAAGEGHTL LPQSWLVQRV RDLDISPQCA
IGADWIEAFG TFLKARIAVA RIADGTPAWQ LQEYAESRDI ISARVKRRLA GKRHAGEHDW
RVLIDQQLPP FADASDPETE ELARIEKARA LEEIYRSRFS VLIGPAGTGK TSLLTALLSL
LSVAAGGVLL LAPTGKARVQ MQKRAKNAQA YTLAQFLLAL GRYDPLTGAY RVTDGANRER
GFKTVVIDEC SMLTEDQLAA ILDAIETTAV ERLILVGDPR QLPPIGAGRP FVDIVRYLND
DHAIANNEAP AGYAELKIVR RQTEQSVAAG QPSAARDDII LSRWFGGEAP DPGADEAWDR
LASGKSIGIR AVRWEGDTDL QTKLLAEIKA ATRAISNKQG FDDERDDATF EISVGGRPYN
KAVYFNLSRS EKDAKGVESR RGGGADAEAW QILSPVRAGE TGVDGLNRWL QKSFRRQARA
WAEPEKYWER KTCKPLGAQG VLYGDKVINV ANARRYDVYP KMEKGYLANG EIGIVVGQYK
GSSWKPKGLP WKIEVEFSSQ LGFKFGFGGS DFGDEGEAPL ELAYALTIHK AQGSEFGMTF
IVIPNPCRLL SRELLYTALT RQREEVVLLH QGDLRALLKL SLFEHSETAR RLTNLFFDPK
PVEHVGAFLE EGLIHRTTRG ELVRSKSEVI IANLLHALGI TYAYEQPFTG QDGSVRYPDF
TIEDAETGRR VFLEHLGMLT EPAYRRRWLA KLDWYRSQGV LSEDEGEGDA GILVTTTEEK
GIDSAGIEQK LRVLLGL
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