Gene Nham_3683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3683 
Symbol 
ID4033281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4052666 
End bp4053406 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content65% 
IMG OID637972095 
Producttwo component transcriptional regulator 
Protein accessionYP_578871 
Protein GI92119142 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.801848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGGA ACCCGCATAT CATTGTCGTC GACGACGAGG CGCCCGCCCG CGAAATGGTC 
GGCGACTATC TCAAAATGCA CGGCTTTACG ATTACGCTGT GCGATGGCGG CAAGAGCCTG
CGCGAGGCCA TCGGCACCGC AACGCCCGAT CTCGTCGTAC TCGATCTGAA CATGCCGGAA
GAGGACGGCC TGTCGATCAT TCGCGACCTC AAGAGCCGCA CCAACGTGCC GGTGATCATG
CTGACGGCGA CGGCCAGCCC GATCGATCGC GTGGTCGGTC TTGAACTCGG CGCCGACGAC
TACGTGGCAA AACCCTGTGA GCTGCGCGAA CTGATGGCGC GCATCCGCTC GGTCCTGCGG
CGGAGCGCGC CGAAGACGGA GACCGCGCCG CCGGACGCCG CAGCCGCCAA ACCCACGGCC
GGGCAGCTCG TCCGCTTCGG CGTCAAATGG CTCGATCTCG AGGCCCAGGC CTTGCGTGAC
GACGAAGGCA ACGAACATCC GCTCACGGCG TCGGAATTCA GCCTGTTGAA AGTCTTCGCC
GCCAACCCGA AGCGGGTTTT GTCGCGCGAG CGGCTGCTGG AATTGGCCAA TGCCCGCGAC
AGCGAAGCCT TCGATCGCGC GATCGATCTG CGAATCATGC GGATCCGGCG CAAGATCGAG
CCCGACCCCG CGAGGCCGGC GGTGATCCGG ACCATCCGGG GCGGCGGCTA TCTGTTTTCA
CCCTCAGGCG ACAAGGCCTG A
 
Protein sequence
MSRNPHIIVV DDEAPAREMV GDYLKMHGFT ITLCDGGKSL REAIGTATPD LVVLDLNMPE 
EDGLSIIRDL KSRTNVPVIM LTATASPIDR VVGLELGADD YVAKPCELRE LMARIRSVLR
RSAPKTETAP PDAAAAKPTA GQLVRFGVKW LDLEAQALRD DEGNEHPLTA SEFSLLKVFA
ANPKRVLSRE RLLELANARD SEAFDRAIDL RIMRIRRKIE PDPARPAVIR TIRGGGYLFS
PSGDKA