| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3661 |
|---|
| Symbol | |
|---|
| ID | 4029879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 4030320 |
|---|
| End bp | 4032656 |
|---|
| Gene Length | 2337 bp |
|---|
| Protein Length | 778 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637972073 |
|---|
| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
|---|
| Protein accession | YP_578849 |
|---|
| Protein GI | 92119120 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
|---|
| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGTTT CCTCTCTTCC TGTCGCCACG CTCGGTACAC CGCGCATCGG TCCGCGCCGC
GAACTGAAAA CCGCGCTCGA AAGCTACTGG TCGGGCAAAT CCAGCGAATC CGCTTTGCTC
GAAGCGGCGG CCGGATTGCG CGCCGCGAAC TGGGCGCGCC AGAAATCGCT CGGCGTCACC
GTCATTCCGT CGAACGATTT CACGCTCTAC GACCATGTGC TCGACACTAG CGTCATGGTC
GGCGCGATAC CGGAGGTCTA CGGGTGGAAA AGCGGGCCCG TGCCGCTCGC AACCTATTTC
GCGATGGCGC GCGGCGCCCA GGGCGAAGAT AGCGATCCGT CCTGCGCGCA TGGTCATCAC
GGCGGCGATC ACGCTCATGG CGCGCCGGCG CAGGAGATGA CCAAGTGGTT CGACACCAAC
TACCACTACA TGGTCCCCGA ATTCAGCAAG GGCCAACGGT TTCAGCTCTC TTCGCTCAAG
GCCGTCGATG AATATCGCGA GGCCAAGGCT CTCGGCTATC AGACCCGGCC GGTGCTGCTC
GGCTCCGTCA CCTATCTGAA ACTCGGCAAA AGCAAAGACA CGAGTTTCGA TTCCCTGTCG
CTGCTTCCAG ATCTGCTTCC GGTCTATATC GACATGCTCC GGCGCCTTGC CGCTGAAGGC
GCCGACTGGG TGCAGATCGA CGAGCCTTGT CTCGTTCTCG ATCTCGATGA TGCGACCCGC
GATGCGCTAT GCAAGACTTA CGAACAACTT GCACAGGCGC TGCCAAACTT GAAAATCATG
CTGACCACCT ATTTCGGCGG CGTCAGCGAC AACCTCGATA CCGCACTATC GCTGCCGGTC
CCGGGCCTTC ACATCGATCT TGTCCGCGCT CCGGAACAAC TCGAAACGGT GGCGGCAAAG
GCGTCGCGAG GTCTGGTTCT GTCGCTCGGC GTCATCGATG GCCGCAACAT CTGGCGCGCC
AACCTGCCGG CGCTGCTCGA CCGGCTTGAG CCGGTGGTCG CCAGGCGTGG CGCTGATCGT
GTGCAGATCG CGCCGTCCTG CTCGCTTCTG CACGTGCCGA TCGACGTGTC GCTTGAGACC
GGTCTCGACG CGGAGTTGAA GAGTTGGCTC GCCTTCTCTG TGCAGAAGAT GGGTGAACTG
GCAACGCTCG GCGAAGCTCT GGCCAAAGGC CGCGCTTCGG TGGGCGATGC GCTGGAGGCA
TCTGCAAACG CCGCGGCGGC GCGCAAGACA TCGCCGAAGG TCCATGATGC CAGGGTCGCA
GCACGGACCG CAGCCATCAC GCCCGACATG ACGAGGCGCA AGAGCGCCTT CGCAGGCCGT
GCCAAGCTGC AGCACGAACG CTTCGGCCTC CCGTCGTTCC CGACGACCAC GATCGGCTCG
TTCCCGCAGA CCGCCGAGGT CCGCAAGGCG CGTTCGGCGC ACGCCAAAGG CATGATGAGC
GATGCCGACT ACGAGAAGTT CCTGCAGGAG GAGACGGCCC GAACGATCCG CTGGCAGGAA
GACATCGGTC TCGACGTGCT CGTGCATGGC GAGTTCGAGC GCAACGATAT GGTTCAGTAT
TTCGGGGAGC AACTTTCGGG ATTCGCCTTC ACCAGGTACG GCTGGGTTCA GAGCTACGGC
TCGCGCTGCG TCCGCCCGCC GATCCTGTTC GGCGACGTGT CCCGGCCCGA ACCGATGACC
GTCGGCTGGT GGAAATACGC TCAATCCCTG ACCGCGAAAC CGATGAAGGG CATGCTCACC
GGCCCCGTCA CCATTCTCAA CTGGTCGTTC GTGCGCGATG ACGTGCCGCG CAGCCTTGCC
TGCCGGCAGA TCGCGCTCGC GATCCGTGAC GAGGTCGCTG GCCTGGAAAC GGCCGGCGCA
TCCATGATCC AGATCGACGA GGCCGCGCTG CGCGAGGGTC TGCCGCTGCG CCGATCGGAA
TGGAAGACGT ATCTCGACTG GGCCGTCGAA TGTTTCCGTC TGTGCGCGAG CGGCGTCGCC
GACGCCACCC AGATCCACAC CCACATGTGC TATTCGGAGT TCAACGACAT CATCGACGCG
ATCGCGGCGA TGGATGCCGA CGTCATCTCG ATCGAGACGT CGCGCTCCAA GATGGAGCTT
CTCGACGCCT TCAAGGATTA CAAATATCCC AACGAGATCG GCCCCGGCGT CTACGACATC
CACTCTCCGC GCGTGCCGGC GGTTGACGAG ATGACCGGCC TGCTCAAACT CGCGCGCCAA
CGCCTTTCCG ACGGCCAACT CTGGATCAAT CCGGATTGCG GACTGAAGAC CCGCAAGTGG
GAGGAGGTCA GGCCGGCGCT TGTCAACATG GTGGAGGCGG CGAGACTGAT GCGTTAG
|
|---|
| Protein sequence | MSVSSLPVAT LGTPRIGPRR ELKTALESYW SGKSSESALL EAAAGLRAAN WARQKSLGVT
VIPSNDFTLY DHVLDTSVMV GAIPEVYGWK SGPVPLATYF AMARGAQGED SDPSCAHGHH
GGDHAHGAPA QEMTKWFDTN YHYMVPEFSK GQRFQLSSLK AVDEYREAKA LGYQTRPVLL
GSVTYLKLGK SKDTSFDSLS LLPDLLPVYI DMLRRLAAEG ADWVQIDEPC LVLDLDDATR
DALCKTYEQL AQALPNLKIM LTTYFGGVSD NLDTALSLPV PGLHIDLVRA PEQLETVAAK
ASRGLVLSLG VIDGRNIWRA NLPALLDRLE PVVARRGADR VQIAPSCSLL HVPIDVSLET
GLDAELKSWL AFSVQKMGEL ATLGEALAKG RASVGDALEA SANAAAARKT SPKVHDARVA
ARTAAITPDM TRRKSAFAGR AKLQHERFGL PSFPTTTIGS FPQTAEVRKA RSAHAKGMMS
DADYEKFLQE ETARTIRWQE DIGLDVLVHG EFERNDMVQY FGEQLSGFAF TRYGWVQSYG
SRCVRPPILF GDVSRPEPMT VGWWKYAQSL TAKPMKGMLT GPVTILNWSF VRDDVPRSLA
CRQIALAIRD EVAGLETAGA SMIQIDEAAL REGLPLRRSE WKTYLDWAVE CFRLCASGVA
DATQIHTHMC YSEFNDIIDA IAAMDADVIS IETSRSKMEL LDAFKDYKYP NEIGPGVYDI
HSPRVPAVDE MTGLLKLARQ RLSDGQLWIN PDCGLKTRKW EEVRPALVNM VEAARLMR
|
|---|
| |