Gene Nham_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3649 
Symbol 
ID4029867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4018161 
End bp4018892 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content64% 
IMG OID637972061 
ProductABC transporter related 
Protein accessionYP_578837 
Protein GI92119108 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.5266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAA AGCCCGCGGT CAAGGAGCCC CTGCTCGACG TCCGCGCGAT CAGCGCGGGC 
TATGGCGGAA TGCCGGTCTT GCACGACGTC ACCCTGACGG TCTACCCGGC CGAGATCGTG
GCGCTGGTCG GCAGCAACGG CGCCGGCAAG ACCACCTTGC TGCGTACGCT GTCGCGCGTG
CTTTCCGCAA CCGGCGGCAT CGTCATGAAC AGCCATGATC TGATGCCGAT GACGTCCGAT
CAGGTCTTCG CGGCCGGCCT GGTTCAGGTT CCGGAAGGCC GCCAGTTGTT CGACCGCATG
AGCGTCCAGG ACAACCTGCT GATGGGCGCC TTCAGGCGAA CCGACAAGGC TGCCGTCGCA
CGCGACCTCG ACAGGATGTA TGCGCTGTTC CCGCGCCTGT CGGAGCGTCG GCGGCAGCTC
GCGGGAAGCA TGTCGGGCGG CGAGCAGCAA ATGTGCGCGA TGGCGCGAGG CCTGATGGCG
GCGCCGATCC TGCTGATGAT CGACGAGATG AGTTTGGGAT TGGCGCCCGT TATCGTCGAA
CAGTTGATGG GTGTCCTGAC GACGATCCGC GACGAAGGGG TAACGGTGCT GCTGGTCGAA
CAGGACGTCA ATCTGGCGCT ATCGACAGCC GACCGGGGTT ACGTGATGGA AACAGGCAGC
ATCGTTCATA GCGGCCCCGC CAAACAACTC ATCGACGACC CGGAAGTGCA GCGCGCCTAT
CTCGGACTCT GA
 
Protein sequence
MSAKPAVKEP LLDVRAISAG YGGMPVLHDV TLTVYPAEIV ALVGSNGAGK TTLLRTLSRV 
LSATGGIVMN SHDLMPMTSD QVFAAGLVQV PEGRQLFDRM SVQDNLLMGA FRRTDKAAVA
RDLDRMYALF PRLSERRRQL AGSMSGGEQQ MCAMARGLMA APILLMIDEM SLGLAPVIVE
QLMGVLTTIR DEGVTVLLVE QDVNLALSTA DRGYVMETGS IVHSGPAKQL IDDPEVQRAY
LGL