Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3649 |
Symbol | |
ID | 4029867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 4018161 |
End bp | 4018892 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637972061 |
Product | ABC transporter related |
Protein accession | YP_578837 |
Protein GI | 92119108 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.5266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCAA AGCCCGCGGT CAAGGAGCCC CTGCTCGACG TCCGCGCGAT CAGCGCGGGC TATGGCGGAA TGCCGGTCTT GCACGACGTC ACCCTGACGG TCTACCCGGC CGAGATCGTG GCGCTGGTCG GCAGCAACGG CGCCGGCAAG ACCACCTTGC TGCGTACGCT GTCGCGCGTG CTTTCCGCAA CCGGCGGCAT CGTCATGAAC AGCCATGATC TGATGCCGAT GACGTCCGAT CAGGTCTTCG CGGCCGGCCT GGTTCAGGTT CCGGAAGGCC GCCAGTTGTT CGACCGCATG AGCGTCCAGG ACAACCTGCT GATGGGCGCC TTCAGGCGAA CCGACAAGGC TGCCGTCGCA CGCGACCTCG ACAGGATGTA TGCGCTGTTC CCGCGCCTGT CGGAGCGTCG GCGGCAGCTC GCGGGAAGCA TGTCGGGCGG CGAGCAGCAA ATGTGCGCGA TGGCGCGAGG CCTGATGGCG GCGCCGATCC TGCTGATGAT CGACGAGATG AGTTTGGGAT TGGCGCCCGT TATCGTCGAA CAGTTGATGG GTGTCCTGAC GACGATCCGC GACGAAGGGG TAACGGTGCT GCTGGTCGAA CAGGACGTCA ATCTGGCGCT ATCGACAGCC GACCGGGGTT ACGTGATGGA AACAGGCAGC ATCGTTCATA GCGGCCCCGC CAAACAACTC ATCGACGACC CGGAAGTGCA GCGCGCCTAT CTCGGACTCT GA
|
Protein sequence | MSAKPAVKEP LLDVRAISAG YGGMPVLHDV TLTVYPAEIV ALVGSNGAGK TTLLRTLSRV LSATGGIVMN SHDLMPMTSD QVFAAGLVQV PEGRQLFDRM SVQDNLLMGA FRRTDKAAVA RDLDRMYALF PRLSERRRQL AGSMSGGEQQ MCAMARGLMA APILLMIDEM SLGLAPVIVE QLMGVLTTIR DEGVTVLLVE QDVNLALSTA DRGYVMETGS IVHSGPAKQL IDDPEVQRAY LGL
|
| |