Gene Nham_3622 details

Gene Information

• Locus tag: Nham_3622
• ID: 4030392
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 3987585
• End bp: 3989606
• Gene Length: 2022 bp
• Protein Length: 673 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 637972034
• Product: OmpA/MotB
• Protein accession: YP_578810
• Protein GI: 92119081
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAACT TTCGCCTGGT GCTGCTGGCC ACGTCGGCTC TCACTGTCGC GTCGTTGACG 
GCGCCGCCGT TGCACGCGCA ATCCGCGCCG GTCCAACTCG CGCAGGCTGC GCCATCCACC 
GAAAAGGCCG CGCCATCCGC CGAAAGCGGA AATGAGACAA AGCGGAAAGA ATCGCCGCCG 
AAAGGTCCTG CTCCGAAAGC TGCACCCGCT CATCCGGCGC CGCCGCCCGG CGCGCCCGAG 
AGACCCGCTG CTCCCCCGCC TCATGCAGCG CCGCCCCATG CGCCGCCTCC ACCGGCTGCC 
GCACGGCCAG CCGCGCCACC GCCTCCGCAT GTGACCCCGC CGACGGCTAC TCCACCACGG 
CCGGCGACAC CGCCGCCGCA CGCAACGCCT CCCGCTGCTC CGGCCGCGCC GAAAGCCGCG 
CCCGCGCCAA AACCGGCGAC ACCTCCGGTG GCCCCGAAAC CGCCCGCGCC CCCGACCGCC 
GCACCGCCGC CATCCCCGTC GAAGGGCACG ACACCTCCGC CGCCGGCCGC GACAAAATCA 
GCCCCGACGA CGCCCGCTCC GCAACCACAA ACCACGTCAC CCTCGACGCC GCCTGCCAAC 
GGGGAGCCGA ATGCGACACG TCGCGACGAG CGAGGCCGGA GCGGACCCGG CCGCGAGCAT 
GGCGGGCCTG GAGGTCCCGG TGACCACCGC AAGGGCGCAG CACCCGCGCA AACGACCCCG 
GCGCCCGGCA GCACGACCCC GGCAGCGCCA GACGTGACCC CGACTTCGCC GCGCGCAACG 
CCGGCCACGC CTTCCGCACC GGTGGCTTCG CCCGCGGCCA CGCCGCCGAG CGGCGCCGCG 
GCGCCAGCGG CCGCCACCCC ACCAACCGGC CCCGCCGGGA CCAAAGCGGG TACTCCGCCG 
TCCACCCCCG GCGGCCAGAC CGCGCTGCCA CCGGGCGCGC CGGTCTCCCG TCACGGGCCG 
CCCACCGTCA CGACGCCGCT ACCGCCGCCG CCGACGAGCG CGCAGGCGCT GAAGCCGATC 
GCGCCGGACG CAGCACGGCA GGGGCCACGC AACATCGAGG CGTTCCGCTC CGAGCGTCGC 
CAGACCGAAC AGGGCGGCCG CACCATCATC ACCGAGCCGG GCCGCGTCAT CGTGCGCGAT 
CCGAGCGGCC AGTCGTTCAT CCGGCACAAT GAAGAAGACC GCTTCCGCTA TGGCGCGCGC 
GACATCCGGC AGGAGCGTGT CGGCAACGAC ACCCGCACCG TCGTGGTGCG GCCGGACGGC 
ACGCAGATCA TCACCGTCAA CGATCGCGAC GGCCGGATGC TGCGGCGAAT CCGCCGCGAC 
CAGCGTGGCC AGGAAGTCGT CATCATCGAC AACAGCTATC GCGACGACGA TCACCGCCGC 
GGTGGCCGAG GCGGCTCGAT CGCGGCCGGT GTCGCCGCCG GCCTGGTTGC CGGTGCGATC 
GGCGGCTACT TCGTGACGCT GCCGCCGCCG GTGATCACCA TCCCGCGCGA CCGCTATATC 
GTCGAGGCGG AAGATGCGCC GCCGGAAGTT ATCTACGACA CGCTGATCGC GCCGCCGGTG 
GAACGGATCG ACCGCCGCTA TACGCTCGAT GAAGTCCGCT ACAGCCCGAT GGTGCGGGCG 
CGGATGCCGA GCATCGATCT CGACACCATC ACCTTCGCGA CCGGATCGTG GGACATCCCG 
CCCGATCAGG CCGCAAAGCT GCGGGTGATC GCGGACGGCA TCAATCGCGC GATCTCGCGC 
AACCCGAGCG AGGTGTTCCT GATCGAGGGC CACACCGACG CGGTGGGCAA CGACGTCGAC 
AACCTGTCGC TGTCGGATCG CCGCGCGCAG TCGGCCGCCG AACTGCTGAC GCAGCAATTC 
CAGGTGCCGC CGGAAAACCT CGTCACCCAG GGCTACGGCG AGCAGAACCT GAAGGTGGAG 
ACCGATGGTC CTTCGCGGGA GAATCGCCGC GTCACGGTGC GTCGCATCAC GCCGCTGTTG 
GACGGTGGTC AGGCGTCGGC GTCTCCGCCG CCGCGTCGCT AG 

 

Protein sequence

MTNFRLVLLA TSALTVASLT APPLHAQSAP VQLAQAAPST EKAAPSAESG NETKRKESPP 
KGPAPKAAPA HPAPPPGAPE RPAAPPPHAA PPHAPPPPAA ARPAAPPPPH VTPPTATPPR 
PATPPPHATP PAAPAAPKAA PAPKPATPPV APKPPAPPTA APPPSPSKGT TPPPPAATKS 
APTTPAPQPQ TTSPSTPPAN GEPNATRRDE RGRSGPGREH GGPGGPGDHR KGAAPAQTTP 
APGSTTPAAP DVTPTSPRAT PATPSAPVAS PAATPPSGAA APAAATPPTG PAGTKAGTPP 
STPGGQTALP PGAPVSRHGP PTVTTPLPPP PTSAQALKPI APDAARQGPR NIEAFRSERR 
QTEQGGRTII TEPGRVIVRD PSGQSFIRHN EEDRFRYGAR DIRQERVGND TRTVVVRPDG 
TQIITVNDRD GRMLRRIRRD QRGQEVVIID NSYRDDDHRR GGRGGSIAAG VAAGLVAGAI 
GGYFVTLPPP VITIPRDRYI VEAEDAPPEV IYDTLIAPPV ERIDRRYTLD EVRYSPMVRA 
RMPSIDLDTI TFATGSWDIP PDQAAKLRVI ADGINRAISR NPSEVFLIEG HTDAVGNDVD 
NLSLSDRRAQ SAAELLTQQF QVPPENLVTQ GYGEQNLKVE TDGPSRENRR VTVRRITPLL 
DGGQASASPP PRR