Gene Nham_3620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3620 
Symbol 
ID4030390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3986636 
End bp3987061 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content65% 
IMG OID637972032 
ProductAllergen V5/Tpx-1 related 
Protein accessionYP_578808 
Protein GI92119079 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.832332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTTG ATGTTCGTGC CTCTTGCAGT GCTAACGGTT CGCATGGCGT GATGTTCCGG 
AGCGGCGGCT GCGCCACCGA GATCAGCGCC TATCGCCGCG CCCATGGGCT GTCAGCCGTT
CGCGCCGATG CGGCGCTCGA TCGGATCGCG CGGAAGCAGG CCGCGGCGAT GGCGCGGGCG
GGAACGGTCA GCCATAACGT GAATGGCAAC TTCTTTGTTA GGATCGCGCC CGTCCATCGC
CGGCTGGCAG CCGAGAATGT CGCGGCTGGT TTTCCGACCT GCGCGGAAAC GATCAGGCAA
TGGGATGCGA GCAGCGGGCA TCGCGCCAAT CTTCGGATGT CGAGCGCGCG GCGTGTCGGC
GTCGCGTCGG TTGCAAAGCC GTCATCGCCC TATCGGCGCT TCTGGGCCAT GGTGATCACG
GATTGA
 
Protein sequence
MTFDVRASCS ANGSHGVMFR SGGCATEISA YRRAHGLSAV RADAALDRIA RKQAAAMARA 
GTVSHNVNGN FFVRIAPVHR RLAAENVAAG FPTCAETIRQ WDASSGHRAN LRMSSARRVG
VASVAKPSSP YRRFWAMVIT D