Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3591 |
Symbol | leuD |
ID | 4030919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3944793 |
End bp | 3945398 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637972002 |
Product | isopropylmalate isomerase small subunit |
Protein accession | YP_578779 |
Protein GI | 92119050 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAGT TCACAACGCT GGAGGGCGTC GCGGCGCCGC TGAAGATCAT CAATGTCGAC ACCGACATGA TCATTCCGAA GCAGTATCTG AAGACCATCA AGCGCACCGG GCTTGGCAAG GGGCTTTTCT CGGAGCAGCG CTACAGGGAC GACGGCTCGG AGAATCCGGA CTTCATTCTC AACAAGCCGG CCTATCGCAA CGCCAAGGTC CTTGTCGCCG GCGACAATTT CGGTTGCGGC TCGTCGCGCG AACACGCGCC GTGGGCGCTG CTCGACTTCG GCATCCGCTG CGTGATCTCC ACCTCGTTCG GCGACATCTT CTACAACAAC TGCTTCAAGA ACGGCATTCT GCCGATCCGC GTGACGCAAG CCGACCTCGA CAAGCTGTTC GACGACGCCG AGCGCGGCGC CAATGCGACG CTGACCATCG ATCTCGCCAA TCAGGAAATC CGCGGCCCCG ACGGCGGCAA AGCGACATTC GAGATCGACC CGTTCCGCAA GCACTGCCTG CTGAACGGCC TCGACGATAT CGGCCTGACG ATGGAAAAGA AGTCGGCGAT CGACAGCTAC GAGGACAAGG CGAGGCGCGA GCGCGCCTGG GCCTGA
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Protein sequence | MDKFTTLEGV AAPLKIINVD TDMIIPKQYL KTIKRTGLGK GLFSEQRYRD DGSENPDFIL NKPAYRNAKV LVAGDNFGCG SSREHAPWAL LDFGIRCVIS TSFGDIFYNN CFKNGILPIR VTQADLDKLF DDAERGANAT LTIDLANQEI RGPDGGKATF EIDPFRKHCL LNGLDDIGLT MEKKSAIDSY EDKARRERAW A
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