Gene Nham_3591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3591 
SymbolleuD 
ID4030919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3944793 
End bp3945398 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content61% 
IMG OID637972002 
Productisopropylmalate isomerase small subunit 
Protein accessionYP_578779 
Protein GI92119050 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAGT TCACAACGCT GGAGGGCGTC GCGGCGCCGC TGAAGATCAT CAATGTCGAC 
ACCGACATGA TCATTCCGAA GCAGTATCTG AAGACCATCA AGCGCACCGG GCTTGGCAAG
GGGCTTTTCT CGGAGCAGCG CTACAGGGAC GACGGCTCGG AGAATCCGGA CTTCATTCTC
AACAAGCCGG CCTATCGCAA CGCCAAGGTC CTTGTCGCCG GCGACAATTT CGGTTGCGGC
TCGTCGCGCG AACACGCGCC GTGGGCGCTG CTCGACTTCG GCATCCGCTG CGTGATCTCC
ACCTCGTTCG GCGACATCTT CTACAACAAC TGCTTCAAGA ACGGCATTCT GCCGATCCGC
GTGACGCAAG CCGACCTCGA CAAGCTGTTC GACGACGCCG AGCGCGGCGC CAATGCGACG
CTGACCATCG ATCTCGCCAA TCAGGAAATC CGCGGCCCCG ACGGCGGCAA AGCGACATTC
GAGATCGACC CGTTCCGCAA GCACTGCCTG CTGAACGGCC TCGACGATAT CGGCCTGACG
ATGGAAAAGA AGTCGGCGAT CGACAGCTAC GAGGACAAGG CGAGGCGCGA GCGCGCCTGG
GCCTGA
 
Protein sequence
MDKFTTLEGV AAPLKIINVD TDMIIPKQYL KTIKRTGLGK GLFSEQRYRD DGSENPDFIL 
NKPAYRNAKV LVAGDNFGCG SSREHAPWAL LDFGIRCVIS TSFGDIFYNN CFKNGILPIR
VTQADLDKLF DDAERGANAT LTIDLANQEI RGPDGGKATF EIDPFRKHCL LNGLDDIGLT
MEKKSAIDSY EDKARRERAW A