| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3475 |
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| Symbol | |
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| ID | 4029996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3825651 |
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| End bp | 3826916 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637971886 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_578664 |
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| Protein GI | 92118935 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCACT TCGATTACCG CGACGGCGTG CTCCACGCCG AAAGCGTGAA TCTTTCGGCG
CTGGCCGAGG TCGTCGGCAC GCCGTTCTAT TGTTACTCGA CCGCGACGCT GGAGCGGCAC
TACCGTGTGT TTGCCGATGC TTTCGCAGGA GTGGACCATC TGGTCTGCTA CGCCGTGAAG
GCCAACTCCA ATCAGTCGGT GCTGCGGACG CTGGCGAAGC TCGGGGCCGG AGCGGACGTC
GTGTCCGGCG GGGAATTGAA GCGCGCACTG GCGGCGGGCA TTCCGGCAAG TAAGATCCTG
TTCTCGGGCG TCGGCAAGAC CGACGCCGAA CTGCGCGCGG CGCTGGCCGT GGACGTTCTC
TGCATCAACG TGGAATCCGA GCCCGAACTC GACCTGCTGT CGAAGCTTGC GTCGGAAGCC
GGGCGCACGG CGCGCATCTC GATTCGCGTC AATCCCGACG TCGATTCCGG TACCCATGCC
AAGATTTCGA CCGGCAGATC GGAGAACAAG TTCGGCATTC CGATCGCACG AGCGCGTGCG
GTCTATGCCC ACGCGGCAAA ACTGCCTGGC ATCGCGGTCA CCGGCGTCGA CATGCACATC
GGTAGCCAGA TCACCGATCT TGGCCCGATG GAGGCGGCCT TCCGTCTGCT GGCGGATTTC
GTCACCACGT TGCGCGCCGA CGGCCACACC ATCAGCCACG TCGATTTCGG CGGCGGCCTC
GGCATTCCCT ATTACGAGGA CCGTGCGGCA CCGCCGGAGC CGCTCGCCTA TGCCGAGATG
GTCAGGCGCG TGACCCACAA TCTCGGCTGC ACGCTGATGT TCGAGCCGGG CCGCATGATC
GTCGGCAACG CCGGCATTCT GGTGACGCGC GTGATCTACG TGAAGCATGG CGACGCCCGG
AATTTCATCA TCATCGATGC CGCCATGAAC GACCTGATTC GCCCGACGCT GTACGAGGCC
TATCACCAGA TCATACCTGT GCGCGCGGCG CCGAAAGATG CCCCGGTGAT GGTTGCGGAC
GTAGTCGGTC CGGTCTGCGA AACCGGGGAT TATCTGGCGC TCGGGCGCAA TCTGCCGGAG
CCGCAAGCCG GTGATCTTCT CGCGATCATG ACCGCGGGCG CCTACGGCGC AGTGCAATCC
GGAACCTACA ACACCCGCGC GCTGATCCCC GAGGTGTTGG TCAAGGACGA CCAGTATGCG
GTGGTCCGCC CGCGCATCGA GGTCGAGCAG CTCATTGCTA TGGACATGTC CGCGCCCTGG
CTATGA
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| Protein sequence | MRHFDYRDGV LHAESVNLSA LAEVVGTPFY CYSTATLERH YRVFADAFAG VDHLVCYAVK
ANSNQSVLRT LAKLGAGADV VSGGELKRAL AAGIPASKIL FSGVGKTDAE LRAALAVDVL
CINVESEPEL DLLSKLASEA GRTARISIRV NPDVDSGTHA KISTGRSENK FGIPIARARA
VYAHAAKLPG IAVTGVDMHI GSQITDLGPM EAAFRLLADF VTTLRADGHT ISHVDFGGGL
GIPYYEDRAA PPEPLAYAEM VRRVTHNLGC TLMFEPGRMI VGNAGILVTR VIYVKHGDAR
NFIIIDAAMN DLIRPTLYEA YHQIIPVRAA PKDAPVMVAD VVGPVCETGD YLALGRNLPE
PQAGDLLAIM TAGAYGAVQS GTYNTRALIP EVLVKDDQYA VVRPRIEVEQ LIAMDMSAPW
L
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