| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3413 |
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| Symbol | |
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| ID | 4033236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3758469 |
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| End bp | 3759446 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637971824 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_578603 |
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| Protein GI | 92118874 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.285872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC AGGCCAACGC GGCCATCGAG TCCGCGTTGC GAACATTCGA GGCGGAGGCT
GGCGGCGTGA CTGCGCTCGC CGCGTCGCTC AAATCCGATC TCGGCCCCGC ATTCGCCGCT
GCCGCCGACA TGATCCGCAA AGCCAAAGGG CGGCTGATCG TCACCGGCCT CGGCAAGTCC
GGCCATATCG GCCGCAAGAT CGCGGCGACC TTCGCATCGA CCGGGACGCC GGCCTTCTTC
GTTCATGCAG CGGAAGCCAG TCACGGCGAT CTCGGCATGA TCACCGCCGA CGACGTCATT
ATGGCGTTGT CCTGGTCCGG CGAGCAGCCG GAGATGAAAA ACCTCATCAC CTATGCCAAG
CGCTTTCGTA TCGCCCTGAT CGCCATGACC GCCGAGCGCG ACTCCACTCT GGGCAAAGCC
GCCGATGTCG TGCTGGTGCA GCCCAGGGCG CGCGAAGCCT GCCCGCACAA CCTCGCGCCG
ACGACGTCCT CGCTGATGCA ACTCGCGCTG GGCGATGCGC TCGCCATCGC GCTGCTGGAG
GGCCGCGGCT TCACCTCGGT CGACTTCAGC GTTCTACATC CGGGCGGAAA ACTCGGCGCG
CTGCTGAAAT ACACTCGTGA CCTGATGCAC AGCGGCGACG CCATCCCGCT GAGACCGCTC
GGCACCAAAA TGTCCGATGC GCTGGTCGAG ATGACATCGA AGGGGTTCGG TTGCGTCGGC
GTCATCGACG GCCACGGACA CCTCGTCGGC ATCGTCACCG ACGGCGATCT GCGCCGTCAC
ATGCGCCCCG ACCTGATGAC CGTCCGCGTC GACGATGTCA TGACCAAAAA CCCGAAGACG
ATCGGACGCG ACCTTCTGGC GGGCGAGGTA CTGGAAATCC TCAACTCGTC GAAGATCACC
GCACTGATCG TGACCGACGG GAAAAAGCCG GTCGGCATCG TGCATCTGCA CGACCTGCTG
CGCGCAGGCG TAGCCTAG
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| Protein sequence | MTDQANAAIE SALRTFEAEA GGVTALAASL KSDLGPAFAA AADMIRKAKG RLIVTGLGKS
GHIGRKIAAT FASTGTPAFF VHAAEASHGD LGMITADDVI MALSWSGEQP EMKNLITYAK
RFRIALIAMT AERDSTLGKA ADVVLVQPRA REACPHNLAP TTSSLMQLAL GDALAIALLE
GRGFTSVDFS VLHPGGKLGA LLKYTRDLMH SGDAIPLRPL GTKMSDALVE MTSKGFGCVG
VIDGHGHLVG IVTDGDLRRH MRPDLMTVRV DDVMTKNPKT IGRDLLAGEV LEILNSSKIT
ALIVTDGKKP VGIVHLHDLL RAGVA
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