Gene Nham_3260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3260 
Symbol 
ID4029721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3593919 
End bp3594875 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content65% 
IMG OID637971672 
Productrubrerythrin 
Protein accessionYP_578454 
Protein GI92118725 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCAAT TTGCCGATTT GACGGAACGC GAGATTCTGG CGCTCGCCAT CTCAAGCGAG 
GAAGAGGACA GCCGCATCTA TCACGGATTC GCCGAAGGGC TGGCCGAACC GTTTCCGGCC
TCCGCCGCCG TCCTCTCCGG CATGGCGGAG GAAGAGGTTC GCCATCGCGG CAGACTGTTC
GATCTCTACC GCGAAAAGTT CGGCGACTAC CTGCCGCTGA TCCGCCGCCA CGACGTCACG
GGTTTCATCA AGCGCAAGCC GCTGTGGCTG ACGCGGCCGC TCGGCCTCGA AGAGGTCCGC
AAATACGTCC TCGGCATGGA GAAGGAGGCG GCGCGGTTCT ATCGCAAAGC CGCCGAAACC
ACGCGCGATG CATCGATCCG CGAATTGCTG ATCAGCCTCG CCGAGGAGGA GGACAGGCAC
GATTCGCTGG CCGGGCAACT CACCGCGAAA CATCTCACAG AGAGGGTCAA GGCCGGCGAA
GCCGACAGCG AGCGCCGCGC GTTCGTTTTA CAGTATGTGC AGCCGGGCCT TGTCGGGCTG
ATGGACGGCT CGGTCTCGAC GCTGGCGCCG CTGTTCGCCG CCGCCTTCGC CACCCACAAA
CCGTTCGAGA CATTTCTGGT CGGCCTCGCG GCGTCCGTCG GCGCCGGCAT TTCCATGGGG
TTTGCCGAGG CGCTGTCGGA CGACGGCAGC TTAAGCGGCC GCGGCTCGCC GTGGATCCGC
GGCGGCGTGT GCGGCCTGAT GACGGCGGTC GGCGGCCTTG GCCACACCCT GCCCTATCTG
ATCCCGGATT TTTATGTGGC TACCGTGCTC GCGGTCGCCG TCGTGATCGT AGAACTCGGC
GTCATTTCCT GGGTGCGCCA TCGCTTCATG GATACGCCAT GGCTGCAGGC GACATTCCAG
ATCGCGGTCG GCGGCGCGCT GGTTTTTGCC GCCGGAATCC TGATTGGGAG CGCCTAG
 
Protein sequence
MKQFADLTER EILALAISSE EEDSRIYHGF AEGLAEPFPA SAAVLSGMAE EEVRHRGRLF 
DLYREKFGDY LPLIRRHDVT GFIKRKPLWL TRPLGLEEVR KYVLGMEKEA ARFYRKAAET
TRDASIRELL ISLAEEEDRH DSLAGQLTAK HLTERVKAGE ADSERRAFVL QYVQPGLVGL
MDGSVSTLAP LFAAAFATHK PFETFLVGLA ASVGAGISMG FAEALSDDGS LSGRGSPWIR
GGVCGLMTAV GGLGHTLPYL IPDFYVATVL AVAVVIVELG VISWVRHRFM DTPWLQATFQ
IAVGGALVFA AGILIGSA