| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3210 |
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| Symbol | glyS |
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| ID | 4033376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3535352 |
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| End bp | 3537646 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637971623 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_578405 |
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| Protein GI | 92118676 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.58245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGATC TTCTGCTCGA ACTGTTCTCC GAGGAAATTC CCGCGCGCAT GCAGGCGAAG
GCGGCGGACG ATCTGCGCAG GATGGTCACC GACAAGCTGG TCGCCGAGGG TCTTGTCTAT
GAGGGTGCGA AAGCCTTCGC AACGCCGCGC CGCCTCGCGC TGACCGTGCA CGGCGTCCCG
GTGCGCCAGC CCGATCTCAA GGATGAGCGC AAGGGGCCGA AGGTCGGAGC ACCCGACGCC
GCCGTGCAAG GCTTTCTGAA AGCCACTGGG CTGAAATCGC TGGATGAGGC AAAAATCCAG
CGCGATCCGA AGAAGGGCGA TTTCTACGTC GCGCTGATCG AGAAGCCGGG CCGTCCGGCG
ATCGACGTGC TGGCGGAATT CTTGCCCGTC ATCGTGCGCA CCTTCCCGTG GCCGAAGCAG
ATGCGCTGGG GCGAGCGCTC GGCGAAGCCC GGCGCGCTGA CCTGGGTGCG GCCGCTGCAT
TCGATCATCG CGACCTTCGG GCCCGAAACT GAAGAACCCG ACGTGGTGCG GTTCGATGTC
AGCGGCATCG CGGCGGGGCA AACTACGCGC GGTCACCGCT TCATGGCGCC GAACGAATTC
AGCGTGCGCC GCTTCGAGGA TTACGAGGCG AAGCTGCACG AGGCGAAAGT CGTGCTCGAC
CCGCAGCGCC GCAAGGACAT CATCCTCGCC GACGCGAAAG AACTGGCGTT CGCGCAAGGG
TTCGGCCTGG TCGAGGATCA GGTGCTGCTC GACGAGGTCG CGGGGCTCGT CGAATGGCCG
GTGGTGCTGA TGGGCTCGTT CGACGAGGAG TTTTTGTCGA TCCCCGGCGA GGTGATCCGC
GCCACCATCC GCAACAATCA GAAGTGTTTT GTGGTGCGGC AGCCTCACCA TCCCCTTGAG
GGGGGAGGTG AAAGACTCGC CAACCGCTTC ATCCTCACAG CCAACATCGA AGCCAGCGAC
GGCGGCAAGG CCATCGTCGC CGGCAACGAG CGCGTGATCC GCGCGCGGCT GTCGGATGCC
AAATTCTTCT ACGAGACCGA CCTGAAAACG AAGCTGGAAT ACCGGCTGCC GAAGTTCGAG
AAGATCGTGT TCCACGAAAA GCTCGGCACG CAAGCCGAGC GCATCGCGCG CATCGAGCGG
TTGGCCGCCG AAATTGCGCC GCTGGTCGTG CCAACCGCGC AAGGCGCGGA AAAAGAAAAA
CTCGTTGCGA AGGCGAAGCG CGCGGCTCAA CTGTGCAAGG CCGATCTGCT CACCGAAGTC
GTCGGCGAAT TCCCCGAGCT GCAGGGCCTG ATGGGGAAAT ACTACGCGCT GGCACAGGAC
GAGGATGCTT CCGTCGCTGC CGCGTGCGAG GAGCACTACA AGCCGCAGGG TCCGAACGAC
CGCGTACCGA CTGATCCTGT TTCGATTGCG GTGGCGTTGG CCGACAAGAT CGACACGCTG
GTTGGCTTCT GGGTCATCGA TGAAAAGCCG ACGGGATCGA AAGACCCGTA TGCGCTGCGC
CGTGCGGCGC TGGGGGCAAT TCGCCTCTTG CTTGAAAACA ATCTTCGATT GTCATTTCGT
CGCTTAGTGG GTTGCGCTAT CCCAGAAATC CAAGTCAAGG TTAAGCTTGC TCCGTTGACG
CGTTCTGCCA TTGCCGCTCA GGAAGCTTTG TATAAGGCTG ATTTTGATAG TAGCGCGAAG
GCTGTTTATC GGGAATTCAG GAGGAAATTG CGGCAGGATG CTTCCGACGA AGTTGATGCC
GCTTATGAAG CGCAATACGA GCAGGCCTCT TCTGACCTCC TCTCATTCTT CGCCGACCGC
CTGAAGGTGC AACTGCGAGA GCAGGGCGCG CGGCATGATC TGGTGGACGC GGTGTTCGCC
CTCGAAGGCC AAGACGATCT CCTGATGATC GTCCGCCGCG TCGAGGCGCT CGGAAAATTC
CTCGATACCG ACGACGGCAA GAATCTGCTG GCGGGTACCA AGCGCGCCTC CAACATCCTC
GCCATCGAGG AGAAGAGGGA CAAGCGCACT TTCGACGGTG CGCCGGACGC CTCGCTTTAT
AGGCTGGACG AAGAGAAGAC GCTCGCCGCC GCCATCGATC AAGTAACGGC CGAAGCGAGC
GCTGCTGTTG CGAACGAAGA CTTTGCTGCC GCCATGGCGG CGATGGCGAA ACTGCGCCCG
GCGGTCGATG CGTTTTTTGA CAAGGTGAAG GTCAACGACG ACGACCCGAC GATTCGTGAA
AACCGCCTGA AGCTGCTCAA CGAAATCCGC GCCGCCACGC GCACGGTCGC GGACTTCTCC
AAAATCCAGG ATTGA
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| Protein sequence | MPDLLLELFS EEIPARMQAK AADDLRRMVT DKLVAEGLVY EGAKAFATPR RLALTVHGVP
VRQPDLKDER KGPKVGAPDA AVQGFLKATG LKSLDEAKIQ RDPKKGDFYV ALIEKPGRPA
IDVLAEFLPV IVRTFPWPKQ MRWGERSAKP GALTWVRPLH SIIATFGPET EEPDVVRFDV
SGIAAGQTTR GHRFMAPNEF SVRRFEDYEA KLHEAKVVLD PQRRKDIILA DAKELAFAQG
FGLVEDQVLL DEVAGLVEWP VVLMGSFDEE FLSIPGEVIR ATIRNNQKCF VVRQPHHPLE
GGGERLANRF ILTANIEASD GGKAIVAGNE RVIRARLSDA KFFYETDLKT KLEYRLPKFE
KIVFHEKLGT QAERIARIER LAAEIAPLVV PTAQGAEKEK LVAKAKRAAQ LCKADLLTEV
VGEFPELQGL MGKYYALAQD EDASVAAACE EHYKPQGPND RVPTDPVSIA VALADKIDTL
VGFWVIDEKP TGSKDPYALR RAALGAIRLL LENNLRLSFR RLVGCAIPEI QVKVKLAPLT
RSAIAAQEAL YKADFDSSAK AVYREFRRKL RQDASDEVDA AYEAQYEQAS SDLLSFFADR
LKVQLREQGA RHDLVDAVFA LEGQDDLLMI VRRVEALGKF LDTDDGKNLL AGTKRASNIL
AIEEKRDKRT FDGAPDASLY RLDEEKTLAA AIDQVTAEAS AAVANEDFAA AMAAMAKLRP
AVDAFFDKVK VNDDDPTIRE NRLKLLNEIR AATRTVADFS KIQD
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